Pongo pygmaeus (Bornean orangutan): 129040824
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Entry
129040824 CDS
T10128
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129040824 (ZC3H12A)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129040824 (ZC3H12A)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129040824
NCBI-ProteinID:
XP_054351632
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All DBs
Position
1:complement(193229295..193240259)
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AA seq
599 aa
AA seq
DB search
MSGPCGEKPVLEASPTMSLWEFEDSHSRQGTPRPAQEPAAEEASAVELQMKVDFFRKLGY
SSTEIHSVLQKLGIQADTNTVLGELVKHGTATERERQASPDPCPQLPLVPRGGGTPKAPN
LEPPLSEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGIV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLTLE
HRKQPCPYGRKCTYGIKCRFFHPERPSCPQRSVADELRANALLSPPRAPSKDKSGRRPSP
SSQSSSLLTESEQCSLDGKKLGAQASPGSRQEGLTQTYAPSGRSLAPSGGSGSSFGPTDW
LPQTLDSLPYISQDCLDSGIGSLESQMSELWGVRGGGPGEPGPPRAPYTGYSPYGSELPA
TAAFSAFGRAMGAGHFSVPADYPPPPPAFPPREYWSEPYPLPPPTPVLQEPPVQSPGAGR
SPWGRAGSLAKEQASVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHPSE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcccctgtggagagaaacctgtcctggaagccagccccaccatgagtctgtgg
gaatttgaggacagccacagccgtcagggcacccccaggccggctcaagagccagccgct
gaggaggcctcggctgtggaattgcagatgaaggtggactttttccggaagctgggctat
tcatccacggagatccacagcgtcctgcagaagctgggcatccaggcagacaccaacacg
gtgctgggcgagctggtgaaacacgggacagccaccgagcgggagcgccaggcctcacca
gacccctgccctcagctccctctagtcccgcggggtggtggcacccctaaggctcccaac
ctggagcctccactctcagaagaggacaaggagggcagcgacctgagaccagtggtcatc
gatgggagcaacgtggccatgagccatgggaacaaggaggtcttctcctgccggggcatc
ctgctggcggtgaactggtttctggagcggggccacacagacatcacagtgtttgtgcca
tcctggaggaaggagcagcctcggcccgatgtgcccatcacagaccagcacatcctgcgg
gaactggagaagaagaagatcctggtgttcacaccgtcacgacgcgtgggtggcaagcgg
gtggtgtgctatgacgacagattcattgtgaagctggcctacgagtctgatgggatagtg
gtttccaacgacacgtaccgcgacctccaaggcgagcggcaggagtggaagcgcttcatc
gaggagcggctgctcatgtactccttcgtcaatgacaagtttatgccccctgatgaccca
ctgggccggcacgggcccagcctggacaacttcctgcgtaagaagccactcactttggag
cacaggaagcagccgtgtccctatgggaggaaatgcacctatgggatcaagtgccgattc
ttccacccagagcggccaagctgcccccagcgctctgtggcagatgagctccgtgccaat
gctctcctctcaccccccagggccccaagcaaggacaaaagtggccggcggccttcacct
tcatcccagtccagctctctgctaacagagagtgagcagtgcagcctggatgggaagaag
ctgggggcccaggcatccccagggtcccgccaagagggtctaacacagacctatgcccca
tcaggaaggagcctcgcacctagcgggggcagtggcagcagcttcgggcccacagactgg
ctcccgcagaccctggactcactcccgtacatctcccaggattgcctggactcgggcatt
ggctccctggagagccagatgtcagaactttggggggttcgaggaggaggccctggtgag
ccgggcccaccccgagccccgtacacgggctacagtccctatggatctgagctcccagcc
actgcggccttctctgcctttggccgggccatgggtgctggccacttcagtgtccctgcc
gactacccacccccgccccctgcctttccacctcgagagtactggtctgaaccgtaccca
ctgcccccacccacaccagtccttcaggagcccccagtgcagagcccaggggctggcagg
agcccgtggggcagggcaggcagcctggccaaggagcaggccagcgtgtataccaagctg
tgtggtgtgtttcccccgcacctggtggaggctgtgatggggcgcttcccgcagctcctg
gacccccagcagctggctgccgagatcctctcctacaagtcccagcaccccagtgagtaa
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