Pongo pygmaeus (Bornean orangutan): 129041031
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Entry
129041031 CDS
T10128
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X4
KO
K10858
DNA mismatch repair protein PMS2
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03430
Mismatch repair
ppyg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129041031 (PMS2)
03460 Fanconi anemia pathway
129041031 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129041031 (PMS2)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129041031 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129041031
NCBI-ProteinID:
XP_054352110
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Position
6:complement(6174667..6212717)
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AA seq
877 aa
AA seq
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MLSLFKKEDTIVAKDFGNLRDTITEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVEN
SLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFG
FRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFST
LPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKE
NIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSST
DRQFFFINRRPCDPAKVSRLVNEVYHVYNRQQYPFVALNISVDSECVDINVTPDKRQILL
QEEKLLLAVLKTSLIGMFDSDVNKLNVSQQPLLDIEGNLIKMHAADLEKPVVEKQDHSPS
LSTQEEKRDVSISRLREAFSLRHATENKPHSPKTPEPRRSPLGQKRGMPSSCTSDAISDR
GVLRPQKEAASSSQGPSDPTDRSEVEKDSGHGSTSVDSEGFSIPDTGSHCSSECAASSPG
DRGSQEHGDSQEKAPETDDSFSDVDCHSNPEDTRCKFRVLPQPTNLASPNTKRFKKEEIL
SNSDIRQKLVNTQNVSASQVDVAVKINKKVVSLDFSMSSLAKRIKQLHHEAQQSESDQNY
RKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDLFIVDQHATDE
KYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERA
KLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTS
EMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVISQN
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctttcacttttcaagaaagaagacaccattgttgccaaagattttggtaatttgaga
gatacaattacagaacctgctaaggccatcaaacctattgatcggaagtcagtccatcag
atttgctctgggcaggtggtactgagtctaagcactgcggtaaaggagttagtagaaaac
agtctggatgctggtgccactaatattgatctaaagcttaaggactatggagtggatctt
attgaagtttcagacaatggatgtggggtagaagaagaaaacttcgaaggcttaactctg
aaacatcacacatctaagattcaagagtttgccgacctaactcaggttgaaacttttggc
tttcggggggaagctctgagctcactttgtgcactgagtgatgtcaccatttctacctgc
catgcatcggcgaaggttgggactcgactgatgtttgatcacaatgggaaaattatccag
aaaaccccctacccccgccccagagggaccacagtcagtgtgcagcagttattttctaca
ctacctgtgcgccataaggaatttcaaagaaatattaagaaggagtatgccaaaatggtc
caggtcttacatgcatactgtatcatttcagcaggcatccgtgtaagttgcaccaatcag
cttggacaaggaaaacgacagcctgtggtatgcacaggtggaagccccagcataaaggaa
aatatcggctctgtgtttgggcagaagcagttgcaaagcctcattccttttgttcagctg
ccccctagtgactccgtgtgtgaagagtatggtttgagctgttcggatgctctgcataat
cttttttacatctcaggtttcatttcacaatgcacgcatggagttggaaggagttcaaca
gacagacagtttttctttatcaaccggcggccttgtgacccagcaaaggtctccagactt
gtgaatgaggtctaccacgtatataatcgacagcagtatccatttgttgctcttaacatt
tctgttgattcagaatgtgttgatatcaatgttactccagataaaaggcaaattttgcta
caagaggaaaagcttttgttggcagttttaaagacctctttgataggaatgtttgatagt
gatgtcaacaagctaaatgtcagtcagcagccactgctggatattgaaggtaacttaata
aaaatgcatgcagcggatttggaaaagcctgtggtagaaaagcaggatcattccccttca
ttaagcactcaagaagaaaaaagggacgtgtccatttccagactgcgagaggccttttct
cttcgtcacgcaacagagaacaagcctcacagcccaaagactccagaaccaagaaggagc
cctctaggacagaaaaggggtatgccatcttcttgcacgtcagatgccatctctgacaga
ggtgtcctgagacctcagaaagaggcagcgagttccagtcagggacccagtgatcctacg
gacagatcggaggtggagaaggactcggggcacggcagcacttccgtggattctgagggg
ttcagcatcccagacacgggcagtcactgcagcagcgagtgtgcggccagctccccaggg
gacaggggctcgcaggaacatggggactctcaggagaaagcgcctgaaactgacgactct
ttttcagatgtggactgccattcaaacccggaagataccagatgtaaatttcgagttttg
cctcagccaactaatcttgcatccccaaacacaaagcgttttaaaaaagaagaaattctt
tccaattctgacattcgtcaaaagttagtaaatactcagaacgtgtcagcctctcaggtt
gacgtagctgttaaaattaataagaaagttgtttccctggacttttctatgagttcttta
gctaaacgaataaagcagttacatcatgaagcacagcaaagtgaaagtgaccagaattac
aggaagtttagggcaaagatttgtcctggagaaaatcaagcagccgaagatgaactaaga
aaagagataagtaaaacgatgtttgcagaaatggaaatcattggtcagtttaacctggga
tttataataaccaaactgaatgaggatctcttcatagtggaccagcatgccacggatgag
aagtataactttgagatgctgcagcagcacaccgtgctccaggggcagaggctcatagcg
cctcagactctcaacttaactgctgttaatgaagctgttctgatagaaaatctggaaata
tttagaaagaatggctttgattttgttatcgatgaaaatgctccagtcactgaaagggct
aaactgatttccttgccaactagtaaaaactggacctttggaccccaggacattgatgaa
ctgatctttatgctgagcgacagccctggggtcatgtgccggccttcccgagtcaagcag
atgtttgcctccagagcctgtcggaagtcggtgatgattgggactgctcttaacacaagc
gagatgaagaaactgatcacccacatgggggagatggaccacccctggaactgtccccat
ggaaggccaaccatgagacacattgccaacctgggtgtcatttctcagaactga
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