Pongo pygmaeus (Bornean orangutan): 129041212
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Entry
129041212 CDS
T10128
Name
(RefSeq) LOW QUALITY PROTEIN: 28S rRNA (cytosine-C(5))-methyltransferase-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppyg03009
]
129041212
Enzymes [BR:
ppyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
129041212
Ribosome biogenesis [BR:
ppyg03009
]
Eukaryotic type
Other ribosome biogenesis factors
129041212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
Methyltr_RsmB-F
NSUN5_N
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
FtsJ
TRIM_CC
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
129041212
NCBI-ProteinID:
XP_063524309
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All DBs
Position
6:complement(12836581..12854665)
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AA seq
768 aa
AA seq
DB search
MWMAWQVSLPELEDRLQCPICLQXIKEPLMLQYGHSYCKGCLVSLSYHLDAELRCLVCRE
AVDGSSSLPNVSLARVIEALRFPEDPEPKVCVHHWNPLSLFCEKDQELICGLCGLLGSHQ
HHPVTPVSTVYSRMKEELAALISELKQEQKKVNELIAKLVNNRTRIVNESDVFSWVIRRE
FQELHHLVDEEKAHCLEGIGGHTRGLVASLDMQLEQAQGTQERLAQAKYVLEEQFSNEGH
HEFIQKLHSMASRCAITHTPCRWTSTGTSGPGRACPWTPEVRAGAEPGAVCDRAVKARGN
MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
SAKKQLRPHLAKVLVYELLGKGFRGRGGXWKALLGRHQARLKAELAWLKVLRGVSWNEDL
LEVGSRPGPASQLPRFVRVNALKTCSXLCSYFKRQGFTYQGRASSLDDFRALKGKHFLLD
SLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTS
HLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYREVHYI
LLDPSCSGSGMPSRQLEEPGAGTPSPARLHALAGFQQRALCHALTFPSLQRLVYSTCSLC
REENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVI
ERVEVPSLTGQSISTRMHTQPSPKEKEXTAKSRSRCLHTALHIAEALG
NT seq
2302 nt
NT seq
+upstream
nt +downstream
nt
atgtggatggcttggcaggtgagcctgccggagctggaggaccggcttcagtgtcccatc
tgcctgcagcatcaaggagcccctgatgctgcagtatggccactcctactgcaagggctg
cctggtctccctgtcctaccacctggacgccgagctgcgctgcctcgtgtgccgggaggc
ggtggacggcagcagctccctgcccaacgtctccctggcccgggtgatcgaagccctgag
gttccctgaggacccggagcccaaggtctgcgtgcaccactggaacccactcagcctctt
ctgcgagaaagaccaggagctcatctgtggcctctgcggtctgctgggctcccaccagca
ccacccggtcacgcccgtctccaccgtctacagccgcatgaaggaggagctcgcagccct
catctctgagctgaagcaggagcagaagaaggtgaatgagctcatcgccaaactggtgaa
caaccggacccgaatcgtcaatgagtcggatgtcttcagctgggtgatccgccgcgagtt
ccaggagctgcaccacctggtggacgaggagaaggcccactgcctggaggggataggggg
tcacacccgtggcctggtggcctccctggacatgcagctggagcaggcccagggaaccca
ggagcggctggcccaagccaagtatgtgctggaagaacagttcagcaatgagggccacca
cgagttcatccagaagttgcactccatggcctccaggtgcgcgatcacacacacaccttg
caggtggacttcgaccggtacttccggtcccggaagggcgtgcccttggaccccggaagt
ccgggcgggggcagagccgggtgcggtttgcgacagagccgtaaaggcgcgcgggaacat
ggggctgtatgctgcagctgcaggcgtgctggccggggtggagagccgccagggctctat
caaggggttggtgtactccagcaacttccagaacgtgaagcagctgtacgcgctggtgtg
cgaaacgcagcgctactccgccgtgctggatgccgtgatcgccagcgccggcctcctcag
tgcgaagaagcagctgcggccgcacctggccaaggtgctagtgtatgagttgttgggaaa
gggctttcgagggcgtgggggctgatggaaggctctgttgggccggcaccaggcgaggct
caaggctgagttggcttggctcaaggttcttcggggtgtgagctggaatgaggacctgtt
ggaagtgggatccaggcctggtccagcctcccagctgcctcgatttgtgcgtgtgaacgc
tctcaagacctgctccgtttatgtagttatttcaagagacaaggtttcacctatcagggt
cgggcttccagcctcgacgactttcgagccctcaaggggaagcattttctcctggactcc
ttgatgccggagctgctggtgtttcccgcccagacagatctgcatgagcacccactgtac
cgggccggacacctcattctgcaggacagggccagctgtctcccagccatgctgctggac
cccccgccaggctcccatgtcatcgatgcctgtgccgccccaggcaataagacgagtcac
ttggctgctcttctgaagaaccaagggaagatctttgcctttgacctggatgccaagcgg
ctagcgtccatggccacgctgctggcccgggctggcgtctcttgctgtgagctggctgag
gaggacttcctggcggtctccccctcagacccgcgctaccgtgaggtccactacatcctg
ctggatccttcctgcagtggctcgggtatgccgagcagacagctggaggagcctggggca
ggcacacctagcccggcgcgtctgcatgccctggcagggttccagcagcgagccctgtgc
cacgcgctcactttcccttccctgcagcggctcgtctactccacgtgctccctctgccgg
gaggagaatgaagatgtggtgcgagatgcgctgcagcagaaccccggcgccttcaggcta
gctcccgccctgcctgcctggccccaccgaggcctgagcacgttcccgggtgccgagcac
tgcctccgggcctcccctgagaccacgctcagcagtggcttcttcgttgctgtaattgaa
cgggtcgaggtgccgagcctcacaggccaaagcatcagcaccagaatgcacacccagccc
agccccaaagaaaaagaagacagcaaaaagccgcagccggtgcttgcacaccgccttgca
catagcagaggctctgggctga
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