Pongo pygmaeus (Bornean orangutan): 129041440
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Entry
129041440 CDS
T10128
Symbol
SND1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1 isoform X2
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
129041440 (SND1)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
129041440
NCBI-ProteinID:
XP_054352992
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Position
6:126705702..127139714
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AA seq
910 aa
AA seq
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MASSAQSGGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLA
RRAAATQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNG
ENIAESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTIRDLKYTI
ENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSET
PEPFAAEAKFFTESRLLQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCVDWS
IAVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVKL
NSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVD
YIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL
AAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL
KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES
MDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAH
YEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIAS
HPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTL
PPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHV
TLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRA
DDADEFGYSR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgcgcagagcggcggctcctccgggggacccgcggtccccaccgtgcag
cggggcatcgtcaagatggtcctctcagggtgcgccatcattgtccgaggtcagcctcgt
ggtgggcctcctcctgagcggcagatcaacctcagcaacatccgtgctggaaatcttgct
cgccgggcagctgccacacaacctgatgcaaaggatacccctgatgagccctgggcattt
ccagctcgagagttccttcgaaagaagctgattgggaaggaagtctgtttcacgatagaa
aacaagactccccaggggcgagagtatggcatgatctaccttggaaaagataccaatggg
gaaaacattgcagaatcactggttgcagagggcttagccacccggagagaaggcatgaga
gctaataatcctgagcagaaccggctttcagaatgtgaagaacaagcaaaggcagccaag
aaagggatgtggagtgaggggaacggttcacatactatccgggatctcaagtataccatt
gaaaacccaaggcactttgtggactcacaccaccagaagcctgttaatgctatcatcgag
catgtgcgggacggcagtgtggtcagggccctgctcctcccagattactacctggttacg
gtcatgctgtcaggcatcaagtgcccaacttttcgacgggaagcagatggcagtgaaact
ccagagccttttgctgcagaagccaaatttttcaccgagtcgcgactgcttcagagagat
gttcagatcattctggagagctgccacaaccagaacattctgggtaccatccttcatcca
aacggcaacatcacagagctcctcctgaaggaaggtttcgcacgctgtgtggactggtcg
attgcagtttacacccggggcgcagaaaagctgagggcggcagagaggtttgccaaagag
cgcaggctgagaatatggagagactatgtggctcccactgctaatttggaccaaaaggac
aagcagtttgttgccaaggtgatgcaggttctgaatgctgatgccattgttgtgaagctg
aactcaggcgattacaagacgattcacctgtccagcatccgcccaccaaggctggagggg
gagaacacccaggataagaacaagaaactgcgtccgctgtatgacattccttacatgttt
gaggcccgggaatttcttcgaaaaaagcttattgggaagaaggtcaatgtgacagtggac
tacattagaccagccagcccagccacagagacagtgcctgccttttcagagcgtacctgt
gccactgtcaccattggaggaataaacattgctgaggctcttgtcagcaaaggtctagcc
acagtgatcagataccggcaggatgatgaccagagatcatcacactacgatgaactgctt
gctgcagaggccagagctattaagaatggcaaaggattgcatagcaagaaggaagtgcct
atccaccgtgttgcagatatatctggggatacccaaaaagcaaagcagttcctgcctttt
cttcagcgggcaggtcgttctgaagctgtggtggaatacgtcttcagtggttctcgtctc
aaactctatttgccaaaggaaacttgccttatcaccttcttgcttgcaggcattgaatgc
cccagaggagcccgaaacctcccaggcctggtgcaggaaggagagcccttcagcgaggaa
gctacacttttcaccaaggaactggttctgcagcgagaggtggaggtggaggtggagagc
atggacaaggccggcaactttatcggctggctgcacatcgatggcgccaacctgtccgtc
ctgctggtggagcacgcactctccaaggtccacttcactgccgaacgcagctcctactac
aagtccctgctgtctgccgaggaggccgccaagcagaagaaagagaaggtctgggcccac
tatgaggagcagcccgtggaggaggtgatgccagtgctggaggagaaggagcgatccgcc
agctacaagcccgtgtttgtgaccgagatcactgatgacctgcacttctacgtgcaggat
gtggagaccggcacccagttggagaagctgatggagaacatgcgcaatgacattgccagt
caccctcctgtagagggctcctatgcccctcgcaggggagagttctgcattgccaaattt
gtagatggagaatggtaccgtgcccgagtagagaaagtcgagtctcctgccaaaatacat
gtcttctacattgactacggcaatagagaggtcctgccatccacccgcctgggtacccta
ccacctgccttcagcactcgggtgctgccagctcaagccacggagtatgccttcgccttc
atccaggtgccccaagatgatgatgcccgcacggacgccgtggacagcgtagttcgggat
atccagaacactcagtgcctgctcaacgtggaacacctgagtgccggctgcccccatgtc
accctgcagtttgcagattccaagggcgatgtggggctgggcttggtgaaggaggggctg
gtcatggtggaggtgcgcaaggagaaacagttccagaaagtgatcacagaatacctgaat
gcccaagagtcagccaagagtgccaggctgaacctgtggcgctatggagactttcgagct
gatgatgcagacgaatttggctacagccgctaa
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