Pongo pygmaeus (Bornean orangutan): 129042335
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Entry
129042335 CDS
T10128
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129042335 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppyg04990
]
129042335 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
ppyg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129042335 (PDLIM2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129042335
NCBI-ProteinID:
XP_054354166
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Position
7:22661430..22677403
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AA seq
600 aa
AA seq
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MRGGRARPAWESFMGLPPRSSAKWGAGQSLDRLRCAPGGRGLAGAPGRMRAPPAGRPQPA
GGPGDSLPHPPSGLRPGGSAWARRAEAAASRARGGGRGGPGITWAEAGPGAPGGLSPESG
RRQRERWRLLAFPPSRAWAPSPTGERQPGERAHLRSSARPALPGAGLLSAPLSARNPGLV
RGPAPCSLASAGAPPRAALSPAGALLLQPPTRRVLCPRSEGGSRTGRAGPSGWAPPRGAR
SAESTDRLKGMALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIV
AINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQAASPGQTNGDSSLEVLATRFQGSVRT
YTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSPLTGEAAISRSFQSLACSPGLPAADRL
SYSGRPGSRQAGLGRAGDSAVLVLPPSPGPRSSRPSVDSEGGSLLLDEDSEVFKMLQENR
EGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCS
TSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYTATLSSRA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgggagagcgcggccggcgtgggagagcttcatggggctgccccctcggtcg
tctgcgaagtggggcgcggggcagtccctggaccggctccgctgtgctccgggcggtcgg
gggcttgcgggcgctccggggaggatgcgggcaccaccggctggacggccgcagcctgca
gggggccctggggacagcctgcctcatccccccagcgggctccggccaggtggcagcgcc
tgggctcgccgcgcggaggcggcggcttcccgggctaggggcggcggcaggggcggcccc
gggatcacatgggcggaggcaggtccgggagccccgggcgggctctccccagagtcgggt
agacggcagcgggagcggtggcgtctgctcgccttccctccctcccgggcctgggcgccc
agcccgacaggtgagcggcagccaggtgagcgcgcccacctgcgctcctccgcgcggcca
gccctccccggcgccgggctcctctccgcgcccctctcggcgcggaaccctggcctcgtc
cgcggcccagctccctgcagcctcgcatcagcgggggcgcccccgcgagctgcgctctcc
ccggccggagcgctcctcctccagcccccgacccgcagggtactttgccctcggagcgaa
ggaggctccagaactggtagagccgggccatcgggctgggcacctccccgcggcgcccgc
agcgcggagtccactgaccggctcaaaggtatggcgctgacggtggatgtggccgggccg
gcgccctggggcttccgtatcacagggggcagggatttccacacgcccatcatggtgacc
aaggtggccgagcggggcaaagccaaggacgccgacctccggcctggagacataatcgtg
gccatcaacggggaaagcgcggagggcatgctgcatgccgaggcccagagcaagatccgc
cagagcccctcgcctctgcggctgcagctggaccggtctcaggctgcgtctccagggcag
accaatggggacagctccttggaagtgctggcaactcgcttccagggctccgtgaggaca
tacactgagagtcagtcctccctaaggtcctcctactccagcccaacctccctcagcccg
agggccggcagccccttctcaccaccaccctccagcagccccctcactggagaggcggcc
atcagtcgcagtttccagagtctggcgtgttccccgggcctccccgctgctgaccgcctg
tcctactcaggccgccccggaagccgacaggccggcctcggccgcgctggcgactcggcg
gtgctggtgctgccgccttccccgggccctcgttcctccaggcccagcgtggactcggaa
gggggaagcctcctcctggacgaggactcggaagtcttcaagatgctgcaggaaaatcgc
gagggacgggcggccccccgacagtccagctcctttcggctattgcaggaagccctggag
gctgaggagagaggtggcacgccagccttcttgcccagctcactgagcccccagtcctcc
ctgcccgcctccagggccctggccacccctcccaagctccacacttgtgagaagtgcagt
accagcatcgcgaaccaggctgtgcgcatccaggagggccggtaccgccaccccggctgc
tacacctgtgccgactgtgggctgaacctgaagatgcgcgggcacttctgggtgggtgac
gagctgtactgtgagaagcatgcccgtcagcgctacactgccaccctcagctctagggcc
tga
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