Pongo pygmaeus (Bornean orangutan): 129042522
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Entry
129042522 CDS
T10128
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129042522 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129042522 (RAD54B)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129042522 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
129042522
NCBI-ProteinID:
XP_054354653
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All DBs
Position
7:complement(106701789..106828507)
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AA seq
910 aa
AA seq
DB search
MRRSAAPSQLQGNSFKKPKFIPPGRCNPGLNEEITKLNPDIKLFEGAANNNTFLPSQNDP
RICSLNLPSEESTREINYRDNCSGKYCFEAPTLATLDPPRTVHSAPKEVAVSKEQEEKSD
SLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFILKNLEGKDIGRGIGYKFKELEKIEE
GQTLMICGKEIEVMGVISPDDFSSGRCFQLGGGSTAISHSSQVARKCFSNPFKSVCKPSS
KENRQNDFQNCKPRHDPYTPNSLVMPRPDKNHQWVFNKNCFPLVDVVIDPYLVYHLRPHQ
KEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLI
VTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFTKSIFYSVLIISYEMLLRSLDQI
KNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPG
ILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLP
PKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENSPHLICIGALKKLCNHPCLLFN
SIKEKECSSTYDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPT
EKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSS
KAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQ
RQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLECECAGEEVHTGD
SLEKSIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERITENVSFIF
QNITTQATGT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgcagcaccaagtcagttgcaggggaattccttcaaaaaaccaaaattt
atacctccaggaagatgtaatccaggtctgaatgaagagattacaaaactgaatccagat
ataaaattatttgagggtgctgcaaataataacacctttctcccatcacaaaatgatcct
agaatatgcagtttaaatctgcctagtgaagaaagtactagagaaattaattacagagat
aattgcagtggaaaatattgttttgaagcacctacactggcaacattagatccacctcgt
acagttcattcggctcctaaagaagtagcagtgtccaaggaacaagaagagaaatctgat
agcctagttaaatatttcagtgttgtttggtgtaagccttcaaagaaaaaacataaaaag
tgggaaggtgatgctgttcttattgtgaaaggaaagtcatttatattaaagaatttggaa
ggcaaagacattggaagaggcattggttataaattcaaagagcttgaaaagatcgaagag
ggccaaacactgatgatttgtggaaaagaaatagaagtcatgggtgtaatctctccagat
gacttcagcagtggcaggtgttttcagcttggaggaggaagtactgctatctcgcattct
tctcaggttgccaggaaatgtttctctaaccctttcaaaagtgtttgtaaaccaagttca
aaggaaaatagacagaatgatttccaaaattgcaaaccacgccatgacccatatacgcca
aattccctcgttatgccacgaccagataagaatcaccagtgggtattcaataagaactgt
ttccctcttgtggatgtagtgattgatccttaccttgtatatcatcttcgaccacatcag
aaagaaggaatcatattcctttatgaatgtgtaatgggaatgagaatgaatggcagatgt
ggagctattcttgctgatgaaatgggtttagggaaaacattgcaatgtatttcgctcatc
tggaccctgcagtgtcagggaccctatggaggcaagccagtaataaagaagacactaatt
gtcacacctggaagcttggtgaataattggaagaaagaatttcaaaaatggctaggaagt
gaaaggatcaagatatttactgttgatcaggaccacaaagttgaagaattcaccaagtct
atattttattctgttcttattatcagttacgaaatgttacttcgttccctggatcaaatt
aagaatataaaatttgatcttctaatctgtgacgaggggcatcgtttgaagaacagtgcc
attaagacaactacagccctcattagcctttcttgtgagaaaagaataattctaactggt
actccaattcagaatgatctgcaagaattttttgcattaattgattttgtaaatccagga
atattaggctctttgtcatcttataggaaaatatatgaagaacccatcattttatcgaga
gaaccttctgcttctgaggaagaaaaggagttaggagaaagaagagcagctgaacttact
tgcctcactggactctttatccttagaagaacccaagaaattataaataaatatctccca
cctaaaatagagaacgttgtcttttgccgaccaggagcactacagattgagctttatcga
aagctgttaaattctcaggttgtcaggttctgccttcaagggttgttggaaaacagtccc
catctaatatgtataggagctcttaaaaaactgtgcaatcacccctgccttttgttcaac
tctataaaagaaaaagaatgtagctcaacttatgataaaaatgaagaaaagagtctatac
aaaggcttgctaagtgtgtttcctgctgactacaaccctctcctgtttactgaaaaggag
tcaggaaaactacaggtgttgtccaagctcttagcagttatccatgaacttcgacctact
gaaaaggtggtgttggtatccaactatacacaaaccttgaacattttacaagaagtatgt
aagcgtcatggatatgcttatacaagacttgatggacaaacaccaatctctcaaaggcag
cagattgttgatggctttaacagtcaacactcttctgtttttatttttttgctaagttca
aaagctggtggtgtaggacttaacctcattggaggatctcacttaattctctatgacatt
gattggaatccagccactgatattcaggcaatgtctagagtatggagagatggtcagaaa
tatcctgtacatatttacagactcctaactacaggtacaatagaagaaaagatctatcaa
aggcagatcagtaagcaaggtctttgtggggcagttgtcgacctcactaagacatctgaa
catattcagttttcagtagaagaacttaaaaatttgttcacattacatgaaagttcagat
tgtgttactcatgacctgcttgaatgtgagtgtgcaggagaagaagttcatacgggtgat
tcgttggaaaaatccattgtctctagagattgtcagcttggtccacatcaccagaaatct
aactccctgaaacctctttctatgtcccagctgaagcaatggaaacatttttctggagat
catttaaatcttacagatccttttcttgaaagaataacagaaaatgtgtcattcattttt
cagaatataaccactcaagctactggcacataa
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