Pongo pygmaeus (Bornean orangutan): 129042681
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Entry
129042681 CDS
T10128
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03082
ATP-dependent chromatin remodeling
ppyg04714
Thermogenesis
ppyg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129042681 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129042681 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129042681 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129042681 (ARID1A)
03021 Transcription machinery [BR:
ppyg03021
]
129042681 (ARID1A)
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129042681 (ARID1A)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Helix-turn-helix
ARID
129042681 (ARID1A)
Transcription machinery [BR:
ppyg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129042681 (ARID1A)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129042681 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129042681
NCBI-ProteinID:
XP_054354909
LinkDB
All DBs
Position
1:complement(204074989..204164141)
Genome browser
AA seq
2281 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGG
GGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAA
LQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGA
AAAAGSKPPPSSSASASSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSS
ARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHHAPMS
PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYG
SQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQP
PYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ
HPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL
SQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVST
SGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ
MPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHT
GMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHG
QPGIPPYGTLPPGRMSHTSMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHV
AANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAA
SPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMW
VDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVG
TSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG
PQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRN
SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRA
AGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSR
YPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRH
EGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATE
RRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDM
TYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPM
TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH
IAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTL
LDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASENSEEK
LISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTE
LLLSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTE
DGAKSSEAIKESSKFPFGINPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCV
SNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCN
KVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFS
TLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCR
EMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFE
PTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQ
S
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggc
ggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggccgccttg
ccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtcgccgcc
gccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcg
ctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcagaactctcac
gaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccc
ccgcctgccccggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcg
gcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcctcgtcttcg
tccttcgctcagcagcgcttcggggccatggggggaggcggcccctccgcggccggcggg
ggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagctcg
gcccggggctaccagggctaccccgggggcgactacggtggcgggccccaggacgggggc
gccggcaagggcccggcggacatggcctcgcagtgttggggggctgcggcggcggcagcg
gcggcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgcccatgagc
cccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatccagtcca
atggatcagatgggcaagatgagacctcagccatatggcgggactaacccatactcgcag
caacagggacctccgtcaggaccgcagcaaggacatgggtacccagggcagccatatggg
tcccagaccccacagcggtacccgatgaccatgcagggccgggcgcagagtgccatgggc
ggcctctcttatacacagcagattcctccttatggacaacaaggccccagcgggtatggt
caacagggccagactccatattacaaccagcaaagtcctcaccctcagcagcagcagcca
ccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtatcagcagcag
ccacagtctcaaccaccacagctccaatcctctcagcctccatactctcagcagccatcc
cagcctccacatcagcagtccccggctccatacccctcccagcagtccacgacacagcag
cacccccagagccagcccccctactcacagccacaggctcagtctccttaccagcagcag
caacctcagcagccagcaccctcgacgctttcccagcaggctgcatatcctcagccccag
tctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccgcaggagcta
tctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaaggga
gggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcctgatctatct
ggttcaatagatgacctccccatggggacagaaggagctctgagtcctggagtgagcaca
tcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttctctcct
catacctcccctcacctgcctggcatccgaggcccttccccgtcccctgttggctctccc
gccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaaccag
atgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatgaaccaa
tcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccccagtacagt
tccccccagcccggctcagccttatctccgcgtcagccttccggaggacagatacacaca
ggcatgggctcctaccagcagaactccatggggagctatggtccccaggggggtcagtat
ggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgccaactac
cccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaaatgcatgga
cagcctggcatcccaccttatggcacactccctccagggaggatgagtcacacctccatg
ggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtcagggatg
tgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgccatgcatgtt
gctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggcatg
atgggaactggacctccttatggacaagggattaatagtatggctggcatgatcaaccct
cagggacccccatattccatgggtggaaccatggccaacaattctgcagggatggcagcc
agcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaacaac
aaggcagatgggacacccaagacagaatccaaatccaagaaatccagttcttctactaca
accaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatgtgg
gtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcctgct
gtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggtgga
ttgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctcaatgtgggc
acttcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgccttt
gaatgcaagattgaacggggagaagaccctcccccagacatctttgcagctgctgattcc
aagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatctatgcagggg
ccccagactccccagtcaaccagcagttccatggcagaaggaggagacttaaagccacca
actccagcatccacaccacacagtcagatccccccattgccaggcatgagcaggagcaat
tcagttgggatccaggatgcctttaatgatggaagtgactccacattccagaagcggaat
tccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatggggcgc
atgtcctatgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgat
cccttcatgtcctcagggcagggccccaatggcgggatgggtgacccctacagtcgtgct
gccggccctgggctaggaaatgtggcgatgggaccacgacagcattatccctatggaggt
ccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagcactggg
gccccacagccgaatctcatgccttccaacccagactcggggatgtattctcctagccgc
taccccccgcagcagcagcagcagcagcaacgacatgattcctatggcaatcagttctcc
acccaaggcaccccttctggcagccccttccccagccagcagactacaatgtatcaacag
cagcagcagaattacaagcggccaatggatggcacatatggccctcctgccaagcggcac
gaaggggagatgtacagcgtgccatacagcactgggcaggggcagcctcagcagcagcag
ttgcccccagcccagccccagcctgccagccagcaacaagctgcccagccttcccctcag
caagatgtgtacaaccagtatggcaatgcctatcctgccactgccaccgctgctactgag
cgccgaccagcaggcggcccccagaaccaatttccattccagtttggccgagaccgtgtc
tctgcaccccctggcaccaatgcccagcaaaacatgccaccgcaaatgatgggcggcccc
atacaggcatcagctgaggttgctcagcaaggcactatgtggcaggggcgtaatgacatg
acctataattatgccaacaggcagagcacgggctctgccccccagggccccgcctatcat
ggcgtgaaccgaacagatgaaatgctgcacacagatcagagggccaaccacgaaggcccg
tggccttcccatggcacacgccagcccccatatggtccctctgcccctgtgccccccatg
acaaggccccctccatctaactaccagcccccgccaagcatgcagaatcacattcctcag
gtatccagccctgctcccctgccccggccaatggagaaccgcacctctcctagcaagtct
ccattcctgcactctgggatgaaaatgcagaaggcaggtcccccagtacctgcctcgcac
atagcacctgcccctgtgcagccccccatgattcggcgggatatcaccttcccacctggc
tctgttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatgaaagacatt
ggaaccccggaggcatggcgggtaatgatgtccctcaagtctggtctcctggcagagagc
acatgggcattagataccatcaacatcctgctatatgatgacaacagcatcatgaccttc
aacctcagtcagctcccagggttgctagagctccttgtagaatatttccgacgatgcctg
attgagatctttggcattttaaaggagtatgaggtgggtgacccaggacagagaacacta
ctggatcctgggaggttcagcaaggtgtctagtccagctcccatggagggtggggaagaa
gaagaagaacttctaggtcctaaactagaagaggaagaagaagaggaagtagttgaaaat
gacgaggagatagccttttcaggcaaggacaagccagcttcagagaatagtgaggagaag
ctgatcagtaagtttgacaagcttccagtaaagatcgtacagaagaatgacccatttgtg
gtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggcctgctgcactgg
cggattggtgggggggacaccactgagcatatccagacccacttcgagagcaagacagag
ctgctgctttcccggcctcatgcaccctgcccaccagcccctcggaagcatgtgacaaca
gcagagggtacgccagggacaacagaccaggaggggcccccgcctgatggacctccagaa
aaacggatcacagccactatggatgacatgttgtctactcggtctagcaccttgaccgag
gatggagctaagagttcagaggccatcaaggagagcagcaagtttccatttggcattaac
ccagcacagagccaccggaacatcaagatcctagaggacgaaccccacagtaaggatgag
accccactgtgtacccttctggactggcaggattctcttgccaagcgctgcgtctgtgtc
tccaataccattcgaagcctgtcatttgtgccaggcaatgactttgagatgtccaaacac
ccagggctgctgctcatcctgggcaagctgatcctgctgcaccacaagcacccagaacgg
aagcaggcaccactaacttatgagaaggaggaggaacaggaccaaggggtgagctgcaac
aaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggttacactc
gccaacatctcggggcagttggacctatccccataccccgagagcatttgcctgcctgtc
ctggacggactcctacactgggcagtttgcccttcagctgaagcccaggaccccttttcc
accctgggccccaatgccgtcctttccccgcaaagactggtcttggaaaccctcagcaaa
ctcagcatccaggacaacaatgtggacctgattctggccacaccccccttcagccgcctg
gagaagttgtatagcactatggtgcgcttcctcagtgaccgaaagaacccggtgtgccgg
gagatggctgtggtactgctggccaacctggctcagggggacagcctggcagctcgtgcc
attgcagtgcagaagggcagtatcggcaacctcctgggcttcctagaggacagccttgcc
gccacgcagttccagcagagccaggccagcctcctccacatgcagaacccaccctttgag
ccaactagtgtggacatgatgcggcgggctgcccgcgcgctgcttgccctggccaaggtg
gacgagaaccactcagagtttactctgtacgaatcacggctgttggacatctcggtatca
ccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttgattggccag
tcatga
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integrated database retrieval system
