Pongo pygmaeus (Bornean orangutan): 129042767
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Entry
129042767 CDS
T10128
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppyg03037
]
129042767 (RP1L1)
04812 Cytoskeleton proteins [BR:
ppyg04812
]
129042767 (RP1L1)
Cilium and associated proteins [BR:
ppyg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129042767 (RP1L1)
Cytoskeleton proteins [BR:
ppyg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
129042767 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
129042767
NCBI-ProteinID:
XP_054355051
LinkDB
All DBs
Position
7:10186709..10206118
Genome browser
AA seq
2383 aa
AA seq
DB search
MNSTARDAQAPSHRECLLPSVARTPSVTKVTPAKKITFLKRGDPQFAGVRLAVHQRAFKT
FSALMDELSQRVPLSFGVRSVTTPRGLHSLSALEQLEDGGCYLCSDKKPPKTPSGPGRPQ
ERNPTAQHLRDIEGQREAPGTSSSRKSLKTPRRILLIKNTDPRLQQTVVLSHRNTRNLAA
FLSKASDLLHFPVKQLYTTSGKKVDSLQALLHSPSVLVCAGHEAFRPPAMKNARRSEAET
LSGLTSRNKNGSWGPKTKPSVIHSRSPPGSRPRLPERPGPSNPPAGPAPDRHPQDTPAQP
GPLVAGDDMKKKVRMNEDGSLSVEMKVRFHLVGEDTLLWSRRMGRASALTAASGEDPVLG
EVDPLCCVWEGYPWGFSEPGVWGPRPCRMGCREAFGRGGQPGPKYEIWTNPLHASQGERV
AARKRWGLAQHVRCSGLWGHGTAGRERCSQDSASPASSTGLPEVSEPDSSCCPRTPEDGV
DSSSPSAQRGAERKAGGSLGEDPGLCTDGAGLGGPEQGGRLTPRARSEEGASSDLSASTG
SHEGSSEWDGRPQGCPGKARAETSQKEATEGGDPGSPALSLSSLRSEDLQAEMQGQGTEQ
ARGASVTKEPLVPGLSGSWDSEGASSTPSTCASSQQGWRKHRSRASAMSSPSSPGLGRVA
PRGHPRHSHYCKDTHSPLDSSATKQVPRPPEQRRACQDGSVPRSSGSSSSTRTQASGNLR
PPSSGSLPSQDLLGTSSATVTPTGHSDFASGVSLHNAPSAGRAGDAGSRTCLPAPIPPHT
SDSCSKSGAASLGEEARDTPQPSSPLVLQVGWPEQGAVGPHQSRCCSQAGTQPAQEAQWG
PSPEASWLCGRYCPTPPRGRPCPQRRSSSCGSTSSSHRSAAQGPGGSQQEEGTRQAGPTP
SPGPNSGASRRSSASQGAGSGGLSQEKTSRSGGGPQGQEEASGVSPSSLPRSSPEAVVRE
WLDNIPEEAILMTYEMVDETTGAAGGGLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPG
QDPEPEGALLGSRDSGPQSGEGVPQGAAPEGVSEAPAEAGADREAPAGCEVSLRALPGRV
SASTQIMRALMGSKQGRPSSVPEVSRPVARRLSCSAGALITCLASLQLFDEDLGSPASKV
RFKDSPRYQELLSISKDLWPGCDLGEDQLDSGLWELTWSQALPDLGSHAVTENFTPTSSS
GVDVSSSSGGSGESSIPCAMDGTLVPQGTELPLKTSNQRPHSRTSENPGDLENQQQCCFP
TFLNAGACACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGERLQEGG
VQLEETKTEEGLQEEGGVQLEETKGTEGKGQQEEEVQLEETEETGGEGLQEEGAQLEEVK
EGPGGGLQGKALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSREDDPVQEEEAGRASAS
AELCPPEGTEEPTEPPSHLSETDPSASESQSGSQLEPGLEKPPGATVTGQEHTQAQLTQG
AAERSSSAACRAALDCDPIWVSVLLKKTKKAFLAHLASAVAELRARWGLQDNDLLDQMVA
ELQQDVAQRLQDSTKRELQKLQGRAGRMVLEPPRQALTGELLLQTQQRRHRLRGLRNLSA
FSERTLGLGPPSFTLEDEPALSTALGSQLGEEAEGEEFCPCEACVRKKVSPTSPKATMGA
TRGPIKEAFDLQQILQRKRGEHTDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGPGLSQGP
GVDEGEDGEESQRLDRDKDPKLGEAEGDAMAQESKGKTHDSETSAGSELGEAEQEGEGIS
ERGETGAQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPKAEGESQPESEGVEAQEAEE
ESQPESEGVEAQEAEEESQPESEGVEAPEAEGESQPESEGVEAQEAEKEAQEAEEEVQPE
SEGVEAPEAEGEAQEAEKEAQPETESVEALETEGEDQPESEGAEAQEAEEEAQEAEEEAQ
EAEGEAQPESEVVEAPEVEGEMQEAEGKAQPESEGVEAPEVEEETQKTEGGAQPESDGVE
AQEAEEEVQEAEGEVQEAEGEAQPESEGIEAQPESEGVEVQEAEGEAQPESEGVEAPEVE
EETQKTEGGAQPESDGVEAQEAEEEVQEAEGEAQPESEGVEAQEAEEEVQEAEGEAQPES
EGVEAPEAEGQAQPESESVEAPEAEGEAQPESEGVEALAAEEEAQPEPEGVEAPEAEGEA
QPESEGETQGEKKGSPQVSLGDSQSEEASESISPVPEDRPTPPPSPGGDTPHQRPGSQTG
PSSSRASSRGNCWWKDSENDHVRGDTRSPDAKSMGALHAERKATRMYPESSTYEQEEARL
GPRTPEQGASEGCDLQEDQALGSLTRTEAVGRADGFGQDDLDF
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccgcgagggatgcccaggccccgagccaccgtgagtgcctcctgccctct
gtggctcgcaccccctcggtcaccaaggtcacgccagccaagaagatcaccttcctcaag
cgaggggatccacagtttgctggggtccgcctggccgttcaccagcgcgcctttaagacc
ttcagcgccctcatggatgagctctcccagcgcgtgcctctctcctttggggtgcgctct
gtcaccacaccccggggcctgcacagcctcagcgccctggagcagctggaagatggtggc
tgctatctctgctctgataagaagccccccaagacccccagtggaccaggccggccacag
gagagaaaccccactgctcagcacttgcgggatatcgaaggccagcgtgaagccccagga
acctcctcctcccggaagagtcttaaaaccccccggaggatactgctaattaagaatacg
gaccctcgcctccagcagacagtggttctcagtcacaggaatactaggaacctggctgcc
tttctcagcaaagcctcagatctcctgcactttcctgtgaagcagttgtacacgaccagc
gggaaaaaggtggactcgctgcaggccctgctgcacagcccctctgtgctggtgtgtgcc
gggcatgaggccttcagacccccagccatgaaaaatgccaggagaagcgaggctgaaact
ttatctgggctgacttcaagaaacaaaaatgggagctgggggccaaagacgaagccgagt
gtgatccattcgcggtccccgccaggcagcaggccacggctgccagaaaggcctggtcct
agcaaccccccggcgggccctgctcctgacaggcaccctcaggacacgccagctcagccg
ggcccgctggtggccggcgatgacatgaagaagaaggtccgcatgaatgaggacggcagc
ctgtcggtggagatgaaagtccgcttccacctggttggcgaggacacgctcctgtggtcc
cggagaatgggcagggccagcgccctcacggcagccagtggggaagaccccgttctgggg
gaggtggaccccctctgctgtgtgtgggagggctacccttggggcttctcagagcctggg
gtgtggggaccccggccctgcaggatgggatgcagggaagcctttggccgaggcgggcag
ccagggcccaagtatgaaatctggacgaatcccctgcacgcctcccagggggagagagtg
gcagctcggaagaggtggggactggcccagcacgtccgctgcagtggcctgtggggccac
gggactgctgggagggagagatgcagccaggacagtgccagcccagcctccagcaccggc
ctccccgaggtctcggagccagactcctcctgctgccccaggaccccggaggacggggtg
gacagcagcagcccctctgcccaaagaggggctgagcggaaagctggagggagcctgggt
gaggaccccggcctgtgcacagatggagcagggctgggtggcccagagcaaggtggccgc
ctgacacccagggcccggagtgaggagggggcttcttcagacttgtcagccagcaccgga
tctcacgagggatccagcgaatgggatgggcggccccagggctgtccaggcaaggcaagg
gccgagacctctcagaaggaggccaccgagggaggcgaccccggttctccagccctgagt
ctttcatctttaaggagtgaggacctgcaggcagagatgcaaggacagggtaccgagcag
gccaggggggcatctgtgacaaaggagcctctggttccaggcctttccggctcctgggac
tcggaaggagcctcttccaccccttccacctgcgcttcatctcagcaggggtggagaaag
catagaagccgggccagtgcaatgtcctcacccagcagccctggccttggccgagtggcc
ccgagaggccatcccaggcattctcactactgcaaggacacccacagcccactggactcc
tctgcaaccaagcaagtgccgaggcctcctgagcagcgaagggcctgccaggatggctca
gtgccacgatcttctggaagctcatcgagcaccaggacccaggcctccgggaacctgaga
cctccctcctcgggatctcttccttcccaggaccttctgggaaccagcagtgccactgtc
acccctacaggccactcagattttgcttctggagtctccctgcacaacgctccctctgcc
gggcgggcaggggacgcggggtccaggacatgcttgccggcccccataccgccccacaca
tccgactcctgctcaaaatctggggctgccagcctgggggaagaggccagggacacgcct
cagccctcctcacccttggttctgcaggttggatggcctgagcaaggggcggtgggcccc
caccaaagccgctgctgctcacaggctgggacgcagccggcccaagaggcccagtgggga
ccctcccctgaggccagctggctgtgtggcaggtactgtcccaccccgcccagggggcgg
ccctgcccccagaggcgctcttccagctgtgggagcaccagcagcagccaccgaagtgct
gcccaggggccaggtgggagccagcaggaggaggggacacgccaggcaggccccacgccg
tccccgggccccaattcaggggcatcaaggagaagcagtgccagccagggtgcggggtct
ggggggctgtcccaggagaagacctcgaggagtgggggaggcccccaggggcaggaggag
gccagtggtgtgtcacccagctctctgccccgatcatctccagaagctgtggtccgtgaa
tggctggacaacattccagaagaggccatactcatgacatatgagatggtggacgagacc
acaggtgcagccgggggtggcctgagaggacccgaggtggaccctggggatgaccattct
ctggaaggcctgggggagccagctcaggcgggacaacagtccctggaaggggaccccggc
caggacccagagccagagggagccctcctggggagtagggacagtggtccccaatcagga
gagggtgtcccccaaggggcagctccagagggagtttccgaggcccctgcagaggccgga
gcagacagagaggccccagccggctgcgaggtgagcctgcgggcacttcctggccgggtg
tctgcctccacgcagatcatgagggcgctgatgggctccaagcagggccggcccagcagc
gtgcccgaagtgtctaggcccgtggccaggaggctcagctgctcagccggggccctcatt
acttgtctggccagtctccagttatttgatgaagaccttgggtctcctgccagcaaagtg
aggttcaaagactcccctcggtaccaggagctgctcagcatctcgaaggacctgtggcca
ggatgtgaccttggggaagaccagctggactcaggcctctgggagctcacatggagccag
gctctgccggaccttgggtcccatgccgtgacagagaacttcacgcccacgtcctcctct
ggtgtggacgtcagcagcagctctggaggctcaggggagagcagcataccctgtgccatg
gacggcaccctagtcccacaggggacagagctgcccctgaaaacctccaaccagaggcct
cattccagaacctctgagaacccaggggatctggaaaaccaacagcagtgttgtttccca
accttcttgaatgccggagcctgcgcttgtgccaccaatgaggatgaagcagaaagagac
agtgaggagcagagggcgagctccaacctggagcagttagctgaaaacacagtgcaagaa
gaggtgcaattagaggaaactaaagaaggaacagaaggagaaaggctgcaagaagggggg
gtgcagttagaggaaactaaaacagaagaagggctgcaggaagaggggggggtgcagtta
gaggaaactaaaggaacagaaggaaaaggacagcaagaagaagaggtgcagttagaggaa
actgaagaaacaggaggagaagggctgcaagaagagggggcgcagttagaggaagttaaa
gaaggaccaggaggaggactgcaaggaaaggctcttgaagagggtctcaaagaggaagga
cttccagaagaaggaagtgtccacgggcaggaattgtcagaggccagctctccagatggg
aaaggctcccgggaagatgacccagtccaggaggaggaagcaggaagagcctctgcctct
gcagagctgtgccccccagagggcacagaggaacccacagagccccctagtcatctcagc
gagacggatccaagtgccagcgagagtcaaagtggctcccagcttgagcctggcttggaa
aagcctcccggagccaccgtgacgggccaagagcacacgcaggcccaactcacccagggg
gctgcagagaggagctcttcagctgcctgcagagcggctctggactgcgaccccatctgg
gtgtccgtgttactgaagaagacgaagaaggccttcctggcccaccttgccagcgcggtg
gctgagctccgagcacgctggggtctgcaggacaacgatctgctggaccagatggtggcc
gagctgcagcaggacgtggcccagcgcctccaggacagcaccaagagagagctccagaag
ctccagggccgggcggggcggatggtgctggagcctcccaggcaggccctcactggggag
ctgctcctgcagacccagcagcgtagacaccgtctccggggcctgcgaaacctctcggcc
ttctctgagcggaccctgggcctggggcccccctccttcaccctggaggacgagccagcc
ctcagcacagccctggggagccagctgggtgaggaggcggagggcgaggagttctgtccc
tgcgaggcctgcgtgaggaagaaagtgagccctacgtcccccaaggccacaatgggggca
accagaggtcccatcaaagaggcctttgacctgcagcagattctgcagaggaagagggga
gaacacaccgatggggaggcagcagaggtggcccctggcaagacccacacagaccccacg
agcaccaggactgtccagggggctgagggagggctggggccggggctgagccaggggcct
ggagtggacgagggtgaggacggcgaggagagccagagactcgacagagacaaagatccc
aaactgggggaggcagagggagatgcaatggctcaggagagtaaagggaaaacccacgac
agcgaaaccagtgcgggcagcgagctgggggaagccgagcaggagggagagggcataagt
gaaaggggagaaactggggcccagggctctgggcatgaggacaacttgcagggtgaagct
gcggcaggaggtgaccaagatccaggacagagtgatggggccgaaggcatagaggccccg
aaggctgaaggggagtcccagccagagtcagaaggtgtagaggcccaggaggctgaagag
gagtcccagccagagtcagaaggtgtagaggcccaggaggctgaagaggagtcccagcca
gagtcagaaggtgtagaggccccagaggcagaaggggagtcccagccagagtcagaaggt
gtagaggcccaggaggcagaaaaggaggcccaggaggctgaagaggaggtccagccagag
tcagaaggtgtagaggccccagaggcagaaggggaggcccaggaggcagaaaaggaggcc
cagccagagacagaaagtgtagaggccctggagactgaaggggaggaccagccagagtca
gaaggcgcagaggcccaagaggcagaagaggaggcccaagaggcagaagaggaggcccag
gaggcagaaggggaggcccagccagagtcagaagttgtagaggccccagaggttgaaggg
gagatgcaggaggcagaagggaaggcccagccagagtcagaaggtgtagaggccccagag
gttgaagaggagacccagaagacagaagggggtgcccagccagagtcagatggtgtagag
gcccaggaggcagaagaggaggtccaggaggcagaaggggaggtccaggaggcagaaggg
gaggcccagccagagtcagaaggtatagaggcccagccagagtcagaaggtgtagaggtc
caggaggcagaaggggaggcccagccagagtcagaaggtgtagaggccccagaggttgaa
gaggagacccagaagacagaagggggtgcccagccagagtcagacggtgtagaggcccag
gaggcagaagaggaggtccaggaggcagaaggggaggcccagccagagtcagaaggtgta
gaggcccaggaggcagaagaggaggtccaggaggcagaaggggaggcccagccagaatca
gaaggtgtagaggccccagaggctgaagggcaggcccagccagagtcagaaagtgtagag
gccccagaggcagaaggggaggcccaaccagagtcagaaggtgtagaggccctggcagct
gaagaggaggcccagccagagccagaaggcgtagaggccccggaggctgaaggggaggcc
cagccagagtcagaaggagaaactcaaggtgagaaaaaggggagccctcaggtcagtcta
ggggatagccagtctgaggaggcttctgaaagcatcagcccagtccctgaggacaggccc
actccacccccttccccaggtggagacactccccaccaaaggccaggctcccaaacaggc
ccttcctcctccagagcatcctctcggggcaactgctggtggaaagactcagaaaatgac
catgtacgtggagacacaaggagccctgacgccaagtccatgggggcccttcatgcagag
aggaaggccaccaggatgtacccagaaagttccacttatgagcaagaagaggcccgtttg
ggcccaaggactccagagcagggggccagtgaaggctgtgacctacaagaggaccaggca
cttggaagtctcacccgcaccgaggcagtgggcagggcagacggctttggccaagatgac
ttagatttctag
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integrated database retrieval system
