Pongo pygmaeus (Bornean orangutan): 129042929
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Entry
129042929 CDS
T10128
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X2
KO
K16630
collagen type XXII alpha
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129042929 (COL22A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
129042929
NCBI-ProteinID:
XP_054355226
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Position
7:complement(151460662..151797337)
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AA seq
1607 aa
AA seq
DB search
MAGLRGNAVAGLLWMLLLLWSGGGGCQAQRAGCKSVHYDLVFLLDTSSSVGKEDFEKVRQ
WVANLVDTFEVGPDRTRVGVVRYSDRPTTAFELGLFGSQEEVKAAARRLAYHGGNTNTGD
ALRYITARSFSPRTGGRPGDRAYKQVAILLTDGRSQDLVLDAAAAAHRAGIRIFAVGVGE
ALKEELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGDRFKHTNGG
TKEITGFDLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTF
RFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGAVKDAVRVVFRGSRVNDL
FDRDWHKIALSIQAQNVSLYIDCALVQTLPIEERENIDIQGKTVIGKRLYDSVPIDFDLQ
RIVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCP
AGEKGEMGVAGPMGLPGPKGDTGATGLVGAPGPKGEKGDVGIRPFGQGEKGEKGSLGLPG
PPGRDGSKGMRGEPGELGELGLPGEVGMRGPQGPPGLPGPPGHVGAPGLQGERGEKGTQG
EKGERGLDGFPGKPGEAGQQGRPGPPGVAGPQGEKGDVGPAGPPGVPGSVVQREGLKGEQ
GAPGPRGHQGPPGPPGAPGPIGPEGRDGPPGLQGLRGKKGDVGPPGIPGLLGLQGPPGSP
GVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGLNGPLGLPGIKGEPGERGEDGLP
GKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEK
GEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGMPGEPGLQGHPGELGPRGPAGP
PGAKGQEGTRGAPGAAGNPGAPGHVGPPGPSGPPGSVGAPGLRGPPGKDGERGEKGAAGE
EGSPGPVGPRGDPGAPGFPGPPGKGKDGEPGLHGSPGLPGPLGTKGDRGAPGIPGSPGSR
GDPGIGVAGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSS
LLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPG
PPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQG
SPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKG
HTGDSGTPGPRGEPGAMGPPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPG
PSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPG
IKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGPPGENGPAGPPGPPGQPGFPGLRGESP
SMETLRRLIQEELGKQLETKLAYLLAQMPPAHMKSSQGRPGPPGPPGKDGLPGRAGPMGE
PGRPGQRGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPG
IPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPGNVKGP
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctccgagggaacgctgtggctggcctcctctggatgctgctgctgctgtgg
agtgggggcggcggctgccaggctcagcgggcaggttgcaaaagtgtccactatgatctg
gtcttcctcctggacacctcctccagcgtgggcaaggaggactttgagaaggtccggcag
tgggtggccaacctggtggacaccttcgaggtgggccccgaccgcacccgtgtgggggtt
gtgcgatacagcgaccggcccaccacggccttcgagttgggactctttggctcgcaggag
gaggtcaaggcggctgcccggcgcctcgcctaccacgggggcaacaccaacacgggtgac
gcgctgcgctacatcacggcccgcagcttctccccacgcaccggcggccgtcccggggac
cgcgcctacaagcaggtggccatcctgctcaccgacggccgcagccaggacctggtgctg
gacgccgcggcggccgcccaccgcgctggcatccgcatctttgccgtgggcgtgggcgag
gcactcaaggaggagctggaggagatcgcctcagagcccaagtccgcccacgtcttccac
gtgtctgacttcaatgccatcgacaagatccggggcaagctgcggcgccgtctttgtgaa
aatgtgctctgtcctagtgttcgtgtagaaggagatcgctttaagcacaccaatggagga
accaaggaaatcacaggttttgacctgatggatttgttcagtgtgaaggaaatcttgggg
aagagagagaatggagctcagagttcctatgtacggatgggatccttccctgtggtgcaa
agtactgaggatgtgttcccccaaggtttacctgatgagtacgcctttgtcacaaccttc
cggttcaggaaaacctctcggaaggaagactggtatatctggcaggtcatcgaccagtac
ggcatcccacaggtctctatccggctggatggtgaaaacaaggcagtcgagtacaacgct
gtgggtgccgtgaaagatgctgtcagggtggtcttccgaggttcccgggtcaatgacctc
tttgaccgggactggcacaagatcgccctgagcatccaggcccagaacgtctccctgtac
attgactgtgcgctggtgcagacactacccatcgaggaacgggagaacattgacatccag
ggcaagactgtgattggcaagcgcctctatgacagtgtgcccattgactttgacctacag
cggattgtgatctattgtgactcaagacatgcagaactggagacttgttgtgatatcccc
tcgggtccgtgccaggtgaccgtggtgacagagcctccacctccacccccaccccagcgg
cctcccaccccaggcagtgaacagattgggtttttgaagaccatcaactgctcctgccca
gccggagagaagggtgaaatgggagttgctggccccatggggctccctggtccaaaggga
gacacaggagccactgggctggttggcgctcctggacctaagggagagaaaggtgatgtg
ggcataagaccttttggccaaggggaaaagggtgaaaagggttccctgggcctgcccggc
ccccctgggagagatggcagcaaaggcatgagaggggaaccaggagagctgggagagctg
gggctgccgggtgaggtcggcatgcgggggccccaaggaccacctggactccccggacct
cctggacatgtcggagctcctggtctccaaggagaacgaggtgaaaagggaactcaagga
gaaaagggagagcgaggcctggatggattccccgggaagcctggggaagcaggacagcag
ggcaggcctggccctcctggtgtggcaggaccccagggagaaaagggtgacgtgggacct
gcggggcctcctggtgtaccgggctcggtggtgcagcgagagggcttgaaaggggaacag
ggagctccaggacccagaggtcaccaaggtccccccggtcctccaggagctccgggtcca
ataggcccagaaggcagggatggacctcctggtttgcaaggtctccgagggaagaaaggt
gacgtgggaccacctggaatccctggattgctggggctgcagggccctccaggatcccct
ggtgtcccaggcccccctggaccaggaggttctccgggtttgcctggagagatcggcttc
ccgggaaagcctggacctcctgggcccacgggaccccctggaaaggatgggctgaatgga
ccattaggcctgccaggaatcaagggagaaccaggagaaagaggggaagatggtctgcct
ggaaaaccaggccttcggggagaaattggggagcagggcctggcaggccgacctggagag
aagggtgaagcaggcctcccaggggctccaggcttcccaggtgtgagaggagagaaagga
gaccagggagaaaaaggtgaactgggacttccaggactgaaaggtgaccgaggtgaaaag
ggtgaagctggtcctgcaggccctcctgggttacctggaactacatccctgttcacacca
catccacggatgcccggagaacaagggcccaaaggagagaagggcgatccaggcatgcct
ggggaaccgggactgcagggccatcctggagaattggggcctcggggacctgctggacca
ccgggtgccaagggacaagaaggcacacgtggggctcctggagcagctggaaaccctggt
gctcctggacatgtcggtccccccggtcccagtggccctccaggaagtgtgggtgctcct
ggcctcagaggcccccctgggaaagatggggagcgtggtgagaagggcgcagcgggggaa
gaaggcagcccagggccagttggtcccaggggagatcctggtgctcctgggttccctggg
ccacccggaaaagggaaggatggagagccgggactccatggatcacctggactccctgga
cccttaggaaccaagggggatcgaggagctcctgggatccctggttctcctggcagccgc
ggtgacccaggcattggggttgctggccctcctggcccttccggaccaccaggagacaaa
ggccccccgggatcacgaggcttacctggattccccggcccccagggcccagctggccgg
gacggtgcaccaggaaatccaggagaaagagggcctcctggcaagccgggcctctcttca
ctactgtctccaggggacataaatctcttggctaaggatgtgtgcaatgactgccctcct
ggccccccaggcctccctggtctaccaggttttaaaggggacaaaggtgtcccaggaaag
ccagggagagaaggcacagaagggaaaaagggagaggctgggcctccaggcctaccaggg
cccccaggaatagctggaccacagggaagtcaaggagaacgtggtgcagatggtgaggtt
ggacagaaaggtgatcagggtcatcctggagttccaggtttcatggggcccccagggaac
cctgggccaccaggggcagatggaattgcgggagctgctggaccaccaggaatccaaggg
tcacctgggaaagaaggccctcctggcccccaaggcccatctggattacccggaatccca
ggagaagaaggcaaagagggcagagatggaaagccaggtccccctggagagccgggcaaa
gcaggagagccaggtctaccaggaccagagggtgccagaggcccacctggcttcaaggga
cacacaggcgattctggcacacccggtccccggggagagcctggtgccatggggcctcct
ggtcaggaagggttaccaggaaaagatggtgacactggacccactgggccacagggtccc
caaggaccaaggggcccaccgggcaagaatggatcaccgggatctccaggagagcctggc
ccttcgggaacccctggccagaaaggaagcaaaggggaaaatggcagcccaggacttcct
ggcttcctgggtccccgtgggcctccgggagaaccaggagagaaaggagtcccaggcaag
gagggagtccctgggaagcctggagagcctggattcaaaggagaaaggggagatcctggg
atcaaaggtgacaaaggacctcctggtggaaagggccagcccggggaccctggaatccca
ggccacaaaggccacacaggcctgatgggtccccaaggaccacctggggagaacggacca
gctggacccccagggcctccaggccagccgggatttccaggactgaggggggagtctcca
tccatggaaaccctgcgtcggcttattcaagaagagctggggaagcagcttgaaaccaaa
cttgcctacctcttggcccagatgcccccagcgcacatgaagtcatctcaaggcagacct
gggcccccagggccccctggaaaagatgggcttccaggccgggccggccccatgggggag
ccaggtcgtcctgggcagaggggtctggaaggaccctctggacccataggtcccaaaggt
gagcgaggagccaaaggtgacccaggtgcacctggagttggcctccgaggcgagatggga
cctcctggaatcccaggtcaacccggggaacctggctatgctaaagatggacttcctggg
atccctggccctcaaggggagacaggaccagctggacatcctggccccccaggacctccc
ggtcccccaggccagtgtgacccttcccagtgtgcctacttcgccagccttgctgcccgg
ccgggtaacgtgaagggtccctag
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