Pongo pygmaeus (Bornean orangutan): 129044065
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Entry
129044065 CDS
T10128
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129044065 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129044065 (EXOSC2)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129044065 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129044065 (EXOSC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
129044065
NCBI-ProteinID:
XP_054357588
LinkDB
All DBs
Position
13:121387790..121403333
Genome browser
AA seq
329 aa
AA seq
DB search
MAMEMRLPVARKPLSERLGRDTKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKTRPWQDVDLSCPART
RRGFAPSSTHLLTYPEAHISQLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIW
IYPTPEHKEEEAGGFIANLEPVSLADREVISRLRNCIISLVTQRMMLYDTSILYCYEASL
PHQIKDILKPEIMEEIVMETRQRLLEQEG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgaggcttccagtggctcgcaagcctcttagcgagagactgggccgc
gacaccaagaaacatctagtggtgccgggggatacaatcactacggacacgggattcatg
cggggccatggaacgtatatgggagaagagaagctcattgcatctgttgctggctctgtg
gagagagtgaacaagttgatctgtgtgaaagctttgaaaaccagatacattggtgaagta
ggagacattgtagtgggacgaatcacagaggttcaacagaagaggtggaaggtggagacc
aactccaggctggattcggtcttgctgctctcgtccatgaaccttcctggaggagagctg
aggagaagatctgcagaagatgagcttgcaatgagaggtttcttacaggaaggggacctt
atcagtgctgaggtccaggcagtgttctctgatggagctgtctctctgcacacgaggagt
ctgaaatatggaaaaactcgcccttggcaggacgtggacttgagctgtcctgccaggacc
agacgtggatttgcacccagctccacccatctccttacctacccggaggcacacatctca
cagctaggtcagggggttttggtccaggtttccccctccctggtgaaacggcagaagacc
cactttcatgatttgccatgtggtgcctcagtgattctcggtaacaacggcttcatctgg
atttacccaacacctgagcacaaagaagaggaagcagggggcttcattgcaaacctggag
cctgtctctcttgctgatcgagaggtgatatcccggcttcggaactgcatcatctcgctg
gtaactcagaggatgatgctgtatgataccagcatcctgtactgctatgaagcatccctt
ccacatcagatcaaagacatcttaaagccagaaataatggaggagattgtgatggaaaca
cgccagaggcttttagaacaggagggataa
DBGET
integrated database retrieval system
