Pongo pygmaeus (Bornean orangutan): 129044142
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Entry
129044142 CDS
T10128
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppyg03037
]
129044142 (WHRN)
Cilium and associated proteins [BR:
ppyg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129044142 (WHRN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
CCM2_C
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
129044142
NCBI-ProteinID:
XP_054357787
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All DBs
Position
13:complement(104925268..105031925)
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AA seq
918 aa
AA seq
DB search
MNAPLDGLSVSSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PYRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYITNHIYTWVDPQ
GRSISPPSGLPQPHGGALRQQEGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDVG
RLPHARTTVDETKWIASSRIGETMANSAGFLGDLTTEGINKPGFYKGPAGSQVTLSSLGN
QTRVLLEEQARHLLNEQERTTMAYYLDEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLERFDHLVLRREIESMKARQPPGPGAGDTYSMVSYSDTGSSTGSHGTSTTVSS
ARERLLWLIDLMENTLDLEETGEAVQGNINTLPDVSVDDVRSTSEGLSSFKPLPPPPPLA
QGNDSPLGQPRKLGREDLQPPSSTPSCSGTVFSAPQNRSPPAGTAPTPGTSSAQDSPSSP
IYASVSPANPSSKRPLDAHLALVNQHPIGPFPRVQSPPHLKSPSAEATVAGGCLPPPSPS
GHPDQTGTNQHFVMVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAG
EAEASAPGRGRQSASTKSRSSKELPRNERPTDGANKPPGLLEPTSTLVRVKKSAATLGIA
IEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK
TKDCDYIDFLVTEFNVML
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgctggacggcctgtcagtgagctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcggctactgtctgccaacgtgcgc
cagctgcaccaggcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacccac
tgtctgaacgcttaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtg
ctgctggacagtccggtcaagcggcgcctgctgcccatgcttcgtctggtcatcccgcgc
tccgaccagctgctcttcgaccaatacacggccgagggcctctacctgcccgccaccacc
ccctacaggcagcccgcctggggcggccccgacggcgcggggccaggggaggtgcgcctg
gtgagtttgcggcgtgccaaggcccacgagggcttgggcttcagcatccgtgggggctcg
gagcacggcgtgggcatctatgtgtctctggtggaaccaggctctctagctgagaaggaa
ggactgcgggtcggggaccagattctgcgcgtcaacgacaaatccctggcccgggtgacc
cacgcggaggccgtcaaggctctgaagggctccaagaagctggtgctgtctgtgtactca
gcagggcgcatccccgggggctacatcaccaaccacatctacacctgggtggacccgcag
ggccgcagcatctccccgccctcgggcctgccccagccccacggtggtgccctgaggcag
caggagggtgaccggaggagcaccctgcacctcctgcaaggaggggatgagaaaaaggtg
aacctggtgctgggggacggccggtccctgggcctcacgatccgtgggggagctgagtat
ggccttggcatttacatcactggcgtggacccaggctctgaagcagaaggcagcgggctc
aaggttggggaccagattctagaagtgaatgggcggagctttctcaacatcctacacgac
gaggcggtcaggctgcttaagtcatctcggcacctcatcctgacagtgaaggacgtcggg
aggctgccccatgcccgcaccactgtggacgagaccaagtggatcgccagttcccggatt
ggggagaccatggcgaactcagcagggtttcttggcgatctcacaacagaaggaataaac
aagccaggattttacaagggcccagccggctcccaggtgaccctgagcagcctggggaac
cagacacgcgtgctgctggaggagcaggctcggcacctgctgaacgagcaggagcgcacc
accatggcctactacctggatgagtaccgtggcggcagcgtctccgtggaggccctcgtc
atggccctgttcgagctgctcaacacccacgccaagttctcactcctctctgaggtgaga
ggcaccatttccccgcaagacctagaacgcttcgaccacctggtgctgaggcgtgagatt
gagtctatgaaggcgcggcagcccccaggccccggggccggggacacctactccatggtc
tcctacagtgacacgggttcgtccacaggcagccacggcacctccaccaccgtcagctcg
gccagggagcggctgctgtggcttatagacctgatggagaacactctggacctggaggaa
actggcgaggctgtccagggcaatatcaacaccctcccagatgtgtccgtggatgatgtc
agatccacctccgaggggctgtcaagcttcaagccactgcctccgccaccacctctggcc
caaggcaacgacagcccactaggccagccaaggaagctggggagagaggacctccagcca
ccttcctccacgccttcctgctcgggcactgtcttctcagctccacagaaccgcagcccg
ccggcgggcaccgcacccaccccagggacctcgtctgcacaggactcgccctcttccccc
atctatgcctccgtctcccctgccaaccccagctccaagaggccactggatgcccatctg
gccctggtcaaccaacaccccatcggccccttcccgcgggtccagtcacccccgcacctg
aaaagcccctctgcagaggccacagtggctgggggctgccttccgcccccatcgccctct
ggccacccagaccagacaggcacaaaccagcactttgtcatggtggaggtccaccgcccc
gacagcgagccagacgtcaatgaagtgagggcgctgccccagacgcgcacagcctctacg
ctctcccagctctccgacagcgggcagactctaagcgaggacagtggtgtagatgctggc
gaggcagaggccagcgccccaggccgaggcaggcagtcggcgtccaccaagagcaggagt
agcaaggagctgcctcggaacgagaggcccacagatggagccaacaaaccgcctggactc
ctggagcccacatccactctggtccgtgtgaagaaaagtgcggccaccctgggcatcgcc
attgagggtggcgccaacacccgccagcccctgcctaggattgtcactattcagagaggc
ggctcagctcacaactgtgggcagctcaaggtgggtcacgtgatcctggaagtgaatggg
ctgacgcttcggggcaaggagcatcgggaggccgcccgcattatcgccgaggccttcaag
accaaggactgtgactacatcgactttctggtcactgagttcaatgtgatgctctag
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