Pongo pygmaeus (Bornean orangutan): 129044898
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Entry
129044898 CDS
T10128
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03410
Base excision repair
ppyg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129044898 (POLL)
03450 Non-homologous end-joining
129044898 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129044898 (POLL)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129044898 (POLL)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129044898 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
129044898 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
NTP_transf_2
BRCT_2
HHH
PAG
Nore1-SARAH
Motif
Other DBs
NCBI-GeneID:
129044898
NCBI-ProteinID:
XP_054359071
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All DBs
Position
8:complement(106853208..106862594)
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AA seq
575 aa
AA seq
DB search
MDPRGILKAFPKRKKIHADASSKVLAKIPRREEGEETEEWLSSLRAHVVRTGIGRARAEL
FEEQIIQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQ
ERRLVDVAGFSIFIPSRYLDQPQPSKAEQDASIPPGTHEALLQTALSPPPPPQKAKEAPN
TQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWVCAQPSSQ
KATNHNLHITEKLEVLAKAYGVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGK
RMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQA
SLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGD
VDVLITHPDGRSHRGIFSRLLDSLRQQAVPSVGPGFLTDDLVSQEENGQQQKYLGVCRLP
GPGWRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNT
QGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaggggtatcttgaaggcatttcccaagcggaagaaaattcatgctgatgca
tcatcaaaagtacttgcaaagattcccaggagggaagagggagaagaaacagaagagtgg
ctgagctcccttcgggcccatgttgtgcgcactggcattggacgagcccgggcagaactc
tttgaggagcagattattcagcatggtggccagctatgccctgcccagggcccaggtgtc
actcacattgtggtggatgaaggcatggactatgagcgagccctccgccttctcagacta
ccccagctgcccccaggtgctcagctggtgaagtcagcctggctgagcttgtgccttcag
gagaggagactggtggatgtagctggattcagcatcttcatccccagtaggtacttggac
cagccacagcccagcaaggcagagcaggatgcttctattcctcctggcacccatgaggcc
ctgcttcagacagccctttctcctcctcctcctccccaaaaggcaaaagaggcaccaaac
acccaagcccagcccatctctgatgatgaagccagtgatggggaagaaacccaggttagc
gcagctgatctggaagccctcatcagtggccactaccccacctcccttgagggagattgt
gagcctagcccagcccctgcggtcctggataagtgggtctgtgcacagccctcaagccag
aaggcgaccaaccacaacctccatatcacagagaagctggaagttctggccaaagcctac
ggtgttcagggagacaagtggagggccctgggctatgccaaggccatcaatgccctcaag
agcttccataagcctgtcacctcgtaccaggaggcctgcagtatccctgggattgggaag
cggatggctgagaaaatcatagagatcctggagagcgggcatctgcggaagctggaccat
atcagtgagagcgtgcctgtcttggagctcttctccaacatctggggagctgggaccaag
actgcccagatgtggtaccaacagggcttccgaagtctggaagacatccgcagccaggcc
tccctgacaacccagcaggccatcggcctgaagcattacagtgacttcctggaacgtatg
cccagggaggaggctacagagattgagcagacagtccagaaagcagcccaggcctttaac
tccgggctgctgtgtgtggcatgtggttcataccgacggggaaaggcgacctgtggtgat
gtcgacgtgctcatcactcacccagatggccggtcccaccggggtatcttcagccgcctc
cttgacagtcttcggcagcaagcagtcccctctgttgggccagggttcctcacagatgac
ttggtgagccaagaggagaatggtcagcaacagaagtacttgggggtgtgccggctccca
gggccagggtggcggcaccggcgcctggacattatcgtggtgccctatagcgagtttgcc
tgtgccctgctctacttcaccggctctgcacacttcaaccgctccatgcgagccctggcc
aagaccaagggcatgagtctgtcagaacatgccctcagcactgctgtggtccggaacacc
caaggctgcaaggtggggcctggccgagtgctgcccactcccactgagaaggatgtcttc
aggctcctaggcctcccctaccgagaacctgctgagcgggactggtga
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integrated database retrieval system
