Photinus pyralis (common eastern firefly): 116158804
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Entry
116158804 CDS
T07438
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116158804
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116158804
Spliceosome [BR:
ppyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116158804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
116158804
NCBI-ProteinID:
XP_031327507
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MADEWNESPAVSNQYAFVDRVISSEYRNTERSSRGFSRGRGGGGGGRRFQNNREDFNSAN
GNGWGTSPKSADTNQITIEVPSRSVGRIIGKGGSKISDLQFESGAKINVTKETVGDNTIV
KISGQTDEIDKAREMIEQLTIDRPPRQQFTLTPSVAPPIENKNVVIDWQALSEECDRMTK
EKWSKAPLIKKNFYIEDPAVAAMTADEVAKFREDNNNIVVARALSKTPNDNKPIPNPVRT
FEEAFRNYPLILEEIRKAGFESPSPIQRQGWPILLSGEDLIGIAQTGTGKTLAFLLPALI
HLDGQPTPREQREGPGVLVIAPTRELALQIEREVKKYHYKNIKAVCVYGGGDRKEQVNII
TKGVDIVIATPGRLNDLVLAGYISTETFTYVVLDEADRMLDMGFEPQIRKVLYEIRPDRQ
TVMTSATWPSGVRRLADSYMVNPVQVYVGSLDLAAVHTVTQTIIMLPDGEEEKFQTFMDF
VHSMQPDDKAIVFCGKKAKADYLASELVINGIDCQAMHGDREQCDREQALADITDGTVQI
LIATDVASRGIDIEDISHVINYDFPKNIEEYVHRVGRTGRAGRSGCSISYFTRADWANAQ
ELIPILEEACQHVPEELHEMSKRFAAWKERKDQERGGRGGGRFGGNRDFGGNRDFGGNRD
FGGNRDFGGNRGFGGGNRDFGYGGGGGGGGGRFGGGGGRKW
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaatggaacgagtcacctgcagtttccaatcaatatgcttttgtggatcgg
gttatttcaagcgaatacagaaatacagaacggtctagtagaggtttttctagaggacgc
ggcggcggaggtggtggtcgtcgatttcagaataatcgtgaagattttaactctgctaac
ggtaatggctggggaacttcgcccaaatcggccgacactaatcaaattaccattgaggtt
cctagcaggagtgttggtcggattataggaaagggaggttcaaagataagtgatctgcaa
tttgaatctggtgccaagattaacgtgacaaaagaaactgttggcgataatactattgtg
aagataagtggccaaactgacgaaatagataaagcaagggaaatgattgagcagttgaca
atagacagacctcctcgtcagcaatttactcttacaccatcggtagctccacccatagaa
aataagaatgttgtcatagactggcaggctttatccgaagaatgtgatcgaatgacaaaa
gaaaaatggtctaaggccccactaataaaaaaaaacttttacatagaagaccccgcagtt
gcagcaatgactgcagatgaagttgctaaatttcgcgaagataataataacattgtggtt
gctagagcgctgtctaaaacaccgaacgataataaaccgatacctaacccagttcgaaca
tttgaggaagctttccgaaattatccattaatattggaagagatcaggaaggcaggtttt
gaatctccgtcgccgattcagcggcagggttggccgattttgctgagcggggaagatctg
ataggaatcgcgcaaaccggaacaggcaagactttagcttttttgttacctgcactaata
catctcgatggtcaacccacaccaagggaacagcgcgaaggtccgggcgtgcttgtgatc
gcacccacacgagagttggccttgcagatcgaacgggaggttaagaaatatcactacaaa
aatattaaggcagtgtgcgtatatggtggcggcgaccgaaaagagcaagtgaatataata
accaagggcgttgatattgtaattgcgacacctggcagattgaacgatctggtccttgcc
ggatatatatcgaccgaaacgtttacctacgtagttctggacgaagccgatcgtatgctg
gatatgggttttgagcctcaaatacgtaaagtgttgtacgaaattcggcctgatcgacaa
acggttatgaccagtgcaacatggccgtctggtgttcgcagattagctgactcatatatg
gtaaatccagttcaggtttatgtaggatctttggatttggctgctgtacatactgtcact
caaacaattatcatgttaccagatggcgaagaggagaaatttcaaacgtttatggatttc
gtacatagcatgcaacctgatgacaaggccattgtattctgtgggaaaaaggctaaggcg
gattatttagcctcggagcttgtaataaatggtattgattgccaagcaatgcacggcgat
cgtgaacagtgtgatcgtgaacaagcattggcagatattacagatggtaccgttcaaatt
ctcatagcgacagatgtagcatccagaggaatagacatagaggacatatcacatgtcatc
aattatgattttccaaagaatatagaagaatacgtccacagagtgggacgtacaggacgg
gccggtcgttcgggatgttccattagttattttactagggcagattgggcaaatgctcaa
gaattaattcctattttagaagaagcctgtcagcatgtcccagaggaacttcacgaaatg
agcaaaaggtttgcagcatggaaggagcgcaaagatcaagagagaggtggtcgaggaggg
ggtcgattcggtggaaatcgcgattttggaggaaatcgtgattttggtggaaatcgcgat
tttggtgggaatcgagactttggaggcaatcgcggttttggtggtggaaatcgcgatttt
ggatacggaggcggcggcggcggtggtggtggtaggtttggaggaggtggcggtagaaaa
tggtaa
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