Photinus pyralis (common eastern firefly): 116159062
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Entry
116159062 CDS
T07438
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116159062
09123 Folding, sorting and degradation
03018 RNA degradation
116159062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116159062
03041 Spliceosome [BR:
ppyr03041
]
116159062
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116159062
mRNA degradation factors
5'-3' decay
Lsm complex
116159062
Spliceosome [BR:
ppyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116159062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
116159062
NCBI-ProteinID:
XP_031327815
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKEALSSFIQQIHQRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKFG
DAFIRGNNVLYISTQKRRI
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaaagaagcattatcttcgtttattcaacaaatccatcaacggccggtggta
gttaagctcaacagtggtgttgattatagaggagtcctggcttgcttagatggatacatg
aacattgctttagaacaaacggaagaatatgtgaatgggcaactgaaaaacaagttcggt
gatgcttttattcgcggaaacaatgttttgtacataagtacgcagaagcgaagaatttaa
DBGET
integrated database retrieval system
