Photinus pyralis (common eastern firefly): 116159185
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Entry
116159185 CDS
T07438
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116159185
03016 Transfer RNA biogenesis [BR:
ppyr03016
]
116159185
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116159185
Spliceosome [BR:
ppyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116159185
Transfer RNA biogenesis [BR:
ppyr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
116159185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116159185
NCBI-ProteinID:
XP_031327985
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MTAFEEFGVLPEIAKAIDEMEWTLPTDIQAESVPLVLGGGDVLMAAETGSGKTAAFCLPI
IQIVWETLKDLESGKAAKVSANTSIPWTISFLDRGNALAVDPSGLRVQSREQKEWHGGRC
TRGVQGGKWGYEAMVTDEGLCRVGWSTLQANLDLGTDRFGFGFGGTGKKSNNKQFDNYGE
AFGKSDVITCLLDMDDGEVKFLKNGNNLGTAFKINKQLANSAFFPAVVLKNAEMAFNFGD
KPFKYDLPSGYKAINSVPKDKMVMNTNGETSADVPQKMLNNAPQAIIIEPSRELAEQTYE
QIRKFKKYLEAPKVRELLVIGGVNVKEQIYALQNDGVDIIVGTPGRLEDLIQSGYILLSN
CRFFVLDEADGLLKAGYTQLIERLHQQMPKITSDGRRLQMIVCSATLHAFEVKKLAEKLM
HFPTWVDLKGEDAVPETVHHVVVNVDPQKDKSWCNLKKHIQTDEVHAQDNVKPGMNTPEA
LSEAVKLLKGEYCIRAIDEHKMDRALIFCRTKVDCDNLEKYFKQVNMKNYSCVCLHGDRK
PHERKANLESFKKGQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAE
RMGLAISLVSTVPEKVWYHGEWCKTRGRGCWNTNLTNVKGCCVWYNEPQYLADIEDHLNI
TIQQIEPDMKVPCDEFDGKVTYGQKRRHVGSDYQTHTAQMAPVVKDLASLESRSQLIYIN
NHLMKMRKK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtttgaagaattcggtgtccttcccgaaatagcaaaagctattgatgaaatg
gaatggactcttcccaccgatatacaagctgaaagcgttcctttagtgttgggcggcggt
gacgtactaatggccgcagaaactggaagcggaaaaaccgccgctttttgtttacccatc
attcaaatcgtttgggaaacgttgaaagatctggaatccggaaaagccgcaaaagtttct
gcaaatacatcgattccttggacgatttcgtttcttgatcgtggtaatgcattagccgtt
gatcctagtggtttaagggtacagtctagagagcagaaagagtggcacggcgggcggtgt
accagaggtgtgcaagggggaaagtggggatatgaggcaatggtaactgatgaaggtctt
tgtcgtgttggatggtccacattgcaggcaaatcttgatcttggcactgacaggtttggt
tttggatttggtggcactgggaagaaatccaacaataagcagttcgataattatggggaa
gcatttgggaaaagtgatgttatcacctgtttactcgatatggatgatggcgaggtgaag
tttttgaaaaatggtaataatctcggaactgccttcaagataaataaacaactggcaaac
tctgcatttttccctgctgttgttttaaaaaatgccgaaatggcatttaattttggcgat
aaaccattcaagtatgacctgccatccggttacaaagctatcaattcagtgccaaaggat
aagatggtgatgaataccaatggtgagacttccgctgatgtgccacaaaagatgttaaat
aacgcccctcaggcgatcataatcgagccatctcgagaattagctgagcaaacttatgaa
caaattcgaaagtttaagaaatatttagaagccccaaaagtacgagagttattagttata
ggaggtgtgaatgttaaagaacaaatatatgcattgcaaaatgatggagttgatattatt
gttggtactcctggtagattggaggatctgatacaatcaggttacatattattatcaaat
tgccgtttctttgtgctggatgaagctgatggactattaaaggcgggatatacacaatta
attgagcgtcttcatcaacaaatgccgaaaatcacctctgatggacgtagattgcagatg
attgtttgcagtgccactttacacgcctttgaagttaaaaaattagctgaaaaattgatg
cactttccaacgtgggtggacctaaaaggtgaagatgcagttccggaaactgtgcatcat
gttgtcgtcaatgtagatccccaaaaggataaaagctggtgcaatttaaaaaagcacatt
cagacggatgaggtgcatgctcaggacaatgtcaaaccaggaatgaacaccccagaagcg
ttgagcgaagcagtaaaattactaaaaggagaatattgcattagggcgatagacgaacat
aaaatggatcgtgccctcattttttgtaggacaaaggtggattgcgataaccttgaaaag
tatttcaagcaggttaacatgaaaaattattcctgtgtctgtttgcacggtgaccgcaag
ccgcacgaacgtaaagccaatttggagtcgtttaagaaggggcaggttaaattcctaatt
tgtacagatgtggcggccagaggtattgacattagtggtttgccattcatgatcaatatt
actttgcccgatgagaaatcaaactacgtgcatagaattggtcgtgttggtagagccgaa
agaatgggtctggcaataagtttagtcagcactgtgcccgaaaaggtgtggtaccacgga
gaatggtgtaaaaccagaggacgtggttgttggaataccaatttaacaaatgtgaaagga
tgctgtgtttggtacaatgaaccacaatatttggcggacatagaagatcatttaaatata
accattcaacagattgagcctgacatgaaggttccttgtgatgaattcgatggaaaggta
acatatgggcaaaaacggagacatgttggttcggactaccaaactcatactgcacaaatg
gcccctgtggtaaaagatttggccagtttggaaagccggtcccaattaatttatattaac
aaccatcttatgaaaatgcgaaaaaagtaa
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