Photinus pyralis (common eastern firefly): 116160918
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Entry
116160918 CDS
T07438
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116160918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116160918
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116160918
mRNA degradation factors
5'-3' decay
Decapping complex
116160918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3744
Motif
Other DBs
NCBI-GeneID:
116160918
NCBI-ProteinID:
XP_031329923
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MADTSFRFGTDSEDNQLSPDEADCLEIEEEEYDALNDETFGTLEDSACLDDWEQQHEQFA
ELAENSKQSDSLDISIDKLSLEHSSYVFPSSKDSVWSYNATQNGDIFGSSFLPNSHKGSG
DKISGIGERGNDTFNLFGKSAKLEAPNLTVGNHIQKKICTVEELERGLLQNRARHEGHSA
SPSLIPQFHHVQPKPHPPVVQHPGRLPPGLYPMGMPPRPPVPHMHHPNAPPGLGRFLPPP
HFMHGGPTPPPGLIYPPHQPFPVNHPFNFPAPPRIGNMHNMHHNNRLNHHNNHQHRNKID
DNTRHRNDYYTPRDEYAGLMSSREKQWLINIQLVQLNTGTPYFDDYYYTIYKERKSKNSK
ENQPPMDRNQWHNRRNNERQDNQNTLTPKVYTPLQFENSLGKLQCGSVTAPRKIIDMDIV
TPDKDSDTSLTTRDTKKIKQLLLELEVFYSYLLKAEDLKNPLYKSNMVKLCEIRQKQRLR
ELDVASTSEQKQEILKCLQQESAPLMENCNDHLLKVLNGLFQEDKYANFLSIRKGKMLLL
RILPSLHVDYFAMQLCDLWTKVLLSIPMVGRKDTAGENLFLRLYPHFKQFIQVSDMSIIL
DIVSNLLEVLSPETSRGTPISCQGKPPLNFITSNKFGMSALAAILIRVETLITENKTTEK
ERTEWFHFVIGWAETLLVPKLLLVVPIEQISSDIFSQHCNRIGNLSLDRMKLLEKWISNG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacttcttttcgctttggcacagacagtgaggataatcaactttcgcccgat
gaagcggattgtttggagattgaagaggaggagtacgacgctcttaacgatgaaacgttt
ggtaccttggaggattcggcgtgtctcgacgattgggagcagcagcacgagcagtttgcc
gagctcgccgaaaattctaaacagtccgatagcttagatatatcgatcgataagttaagt
ttagagcattcgagttatgtttttcctagttctaaggattcggtgtggtcgtacaacgca
actcaaaatggtgatatttttggtagtagttttttgccaaattcgcataagggatcgggt
gataaaattagtgggattggtgaacggggtaatgacaccttcaatttgtttggtaaaagt
gccaaattggaggcccctaatcttacagtcggaaaccatattcagaaaaaaatctgtacg
gtggaggagttagagcgtggattgttgcagaatcgtgcaaggcacgaagggcattcagcc
tcaccgagtctcattccacagtttcatcatgtgcaaccaaaaccgcatcctccagttgtt
cagcatcctggtcgcttacctcctggattatatccaatgggaatgccgccacgtccgcct
gttccacacatgcatcatccaaatgctccccctggcttaggaaggtttctcccaccacct
catttcatgcacggcggtccaacgccgccgcccggcttaatttatccacctcatcaaccg
tttccagttaatcacccgtttaactttcctgcgcccccccgaatcggcaacatgcataac
atgcaccataacaatcgactgaaccaccacaataaccaccaacataggaataaaatcgac
gacaacacacgacatagaaacgactactacacaccacgcgacgagtatgccggactcatg
agtagtagagagaaacagtggttaattaatattcagttggtgcagctaaatacgggaacc
ccgtactttgacgactattattacacgatatacaaggaacgcaagtcaaagaacagtaag
gagaatcaaccccctatggatcgcaatcagtggcataataggcgcaataatgaaaggcag
gataatcagaacactcttacacctaaagtgtacacaccattgcagtttgaaaactctctg
ggaaagttacagtgcggctcagttaccgccccacgaaagatcatcgatatggacatcgta
actcccgataaagatagcgataccagcctaacgacgcgagacactaaaaaaataaaacaa
cttctcctagaattagaagtattttacagttatctgctaaaagcggaggatttaaaaaat
cctttatacaaaagtaatatggtaaaattatgcgagattaggcaaaaacagagattgcgc
gagctagacgtcgcctcgacctcggaacagaagcaggaaatcctaaaatgtttacagcaa
gaaagcgcgccgcttatggagaattgtaacgaccatcttttgaaagtactcaacggatta
ttccaggaagacaaatacgccaactttcttagtattcgaaagggaaagatgttgctctta
cgaattctacccagcctacacgtggactactttgcgatgcaactctgcgatttgtggacg
aaagtattgctaagcataccgatggtcggtcgtaaagatacagccggagaaaatctcttc
cttcgcctgtatccgcactttaaacaattcattcaagttagtgatatgagcatcatcttg
gatatagtttcgaacttgcttgaggtgttgagcccggagaccagtcgaggcacgccaata
agctgtcaaggcaaaccgcctctaaacttcataacgtcgaacaaatttggaatgtccgct
ttggcagcaattctcattcgtgttgagactttaatcacggaaaataaaacaaccgagaag
gaaagaactgaatggttccactttgttatcggttgggcggagacactcctcgtgccaaag
cttcttcttgtcgtaccaatcgaacaaatatcttccgatattttcagtcaacactgcaac
cgaatcggaaatttatcgctagatagaatgaaactattggagaaatggatatcgaatgga
agttaa
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