Photinus pyralis (common eastern firefly): 116161020
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Entry
116161020 CDS
T07438
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03030
DNA replication
ppyr03410
Base excision repair
ppyr03420
Nucleotide excision repair
ppyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116161020
03410 Base excision repair
116161020
03420 Nucleotide excision repair
116161020
03430 Mismatch repair
116161020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppyr03032
]
116161020
03036 Chromosome and associated proteins [BR:
ppyr03036
]
116161020
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116161020
DNA replication proteins [BR:
ppyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116161020
DNA Replication Termination Factors
ELG1-RFC complex
116161020
Chromosome and associated proteins [BR:
ppyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116161020
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116161020
Check point factors
HRAD17(Rad24)-RFC complex
116161020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_14
AAA_22
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
RuvB_N
AAA_assoc_2
AAA_19
AAA_18
AAA_11
nSTAND3
AAA_5
NTPase_1
DNAX_ATPase_lid
Gp44_lid
AAA_3
ABC_tran
MeaB
AAA_2
IstB_IS21
RNA_helicase
MipZ
MCM
AAA_28
SRP54
AAA_29
AAA_25
DUF6933
Motif
Other DBs
NCBI-GeneID:
116161020
NCBI-ProteinID:
XP_031330060
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MGDSMDVDAPIPSTSKPVKEVPPAHNLPWIEKYRPQTFADIVGNEDTIKRLSIFSQQGNV
PNIIIAGPPGVGKTTTILCLAKILLGPSFKDAVLELNASNDRGIDVVRNKVKMFAQQKVT
LPPGRHKIIILDEVDSMTEGAQQALRRTMEIYSNTTRFALACNYSEKVIEAIQSRCAILR
YSKLTDAQVLARVIQICRNENVEYSEDGLEAIVFTAQGDMRQALNNLQSTCNGFGFVSAE
NVFKVCDEPHPLLIKDMLLECTKGEIRKAYKIMAHLWSLGYAAEDIIKNVFKVCKNLDVD
EPLKLSYIKEIGITHMKIVDGLTTLVQMSGLLARLCMIGQGIEYKS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattctatggacgtagacgcaccaataccaagtacatcaaaaccagtgaaagag
gttcctcctgctcacaatcttccttggattgaaaagtatcgaccacaaactttcgcagac
atcgttggcaatgaggatacaatcaaacgtctatcgatattctcgcaacaaggaaacgta
ccaaacattattatagcgggaccaccaggtgtcggtaaaacaacaaccatattgtgtttg
gcgaaaatcttgttaggcccctcgtttaaggacgcagtcctggaattaaatgcgtcaaac
gatcgcggtatcgacgtcgttcgtaacaaagtgaaaatgtttgcccaacaaaaggtaacg
ctgccccccggcaggcataagataatcatcttggacgaggtcgatagtatgacggagggg
gcgcaacaagccttgagacgaaccatggaaatttacagtaacacgactcgttttgcgctc
gcctgcaattacagcgagaaggtcatcgaagccatacagtcgcgctgtgccattttacga
tattctaaattgacagacgcccaggttctggcacgtgttatacaaatttgtcgtaacgaa
aacgtggagtactcggaggacggactggaggcaatcgtttttacggcgcagggcgatatg
cggcaggcgcttaacaatctgcagtcgacgtgcaacggtttcgggttcgttagcgcggag
aacgtgttcaaggtttgcgacgagccccatccgctacttattaaagatatgttattggag
tgcacaaagggggagatacggaaagcttataagattatggcgcacttgtggagtttgggc
tacgccgccgaagacatcatcaaaaacgtcttcaaggtgtgcaaaaatctcgacgtcgac
gagccgctcaaactgtcgtacattaaggaaatcggcataacgcacatgaaaatcgttgac
ggattaacgacgctcgtacaaatgtccggcctcttggcgagattgtgcatgatcggtcag
ggaatcgaatataagtcgtga
DBGET
integrated database retrieval system
