Photinus pyralis (common eastern firefly): 116161262
Help
Entry
116161262 CDS
T07438
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116161262
09123 Folding, sorting and degradation
03018 RNA degradation
116161262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116161262
03041 Spliceosome [BR:
ppyr03041
]
116161262
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116161262
mRNA degradation factors
5'-3' decay
Lsm complex
116161262
Spliceosome [BR:
ppyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116161262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
DAHP_snth_FXD
Motif
Other DBs
NCBI-GeneID:
116161262
NCBI-ProteinID:
XP_031330419
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSSGLDVFVNHTVAIITSDGRNFIGTLKGFDQTINIILDESHERVYSTATGVEQVMLGLH
IIRGDNVAIIGLIDEELDNRLNLASIKAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggtttagacgttttcgtgaaccataccgtcgcaataatcacgtcggatggc
cgaaactttatcggcactctcaaaggattcgatcagaccattaacatcatcctcgacgag
tcgcacgagcgcgtgtattcgacggcgacgggcgtcgagcaggtcatgttgggcttacat
atcataaggggcgataacgtggcgatcatagggttaattgacgaagaattggacaataga
cttaatttggccagtattaaggcagaacctttgaattctgttgtacattaa
DBGET
integrated database retrieval system
