Photinus pyralis (common eastern firefly): 116161368
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Entry
116161368 CDS
T07438
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116161368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116161368
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116161368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Lant_dehydr_C
AAA_29
Motif
Other DBs
NCBI-GeneID:
116161368
NCBI-ProteinID:
XP_031330559
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MSKRSSLGQSNTLFNYFQSPGNKSSAKKQNGNSTKESNLMGSGSDNEDDTPVLARKRNRT
ALFDSDSDTETSVPEVKTKKKPKIAKEEGSLQLFTFEKSNRSLSRDDNVNSLASDTQWFH
ERLEFLKPDKIRDINGNRSDHPDYDEKTLYVPQEFLNKQTPAMRQWWILKSKHYDTVLFF
KIGKFYEFYHMDAVIGVNYLNFSFVKGGEFAHSGFPEVAYGRMASTLIEQGFKVARVEQT
ETPEMMNDRCRGHKVTKYDRVVRREICEITTQATCLYGAQMTDAKQSLSCYLLAIAEKPI
NGGSAFGVCFVDTSVGDIFLGQFEDDKHCSRLLRIFAQYRPALILLERRGFQWSTLEVLK
KTISSVKRDVLTSGTQFLSPEKTIDLLMKECYFRDKNNDFEWPTVLAEFVDGHLPKLGCE
LALKALGACVWYLKDSELDIKVLSMKKFHIYKPADQTSDKALDRQAFMILDFITIENLNL
LGEKGTLQKTLDYCETSFGKRLLQQWICRPLCQEHKIQERQNAIHQLCENDEVRQAVRAI
FRKLPDLERLVSKIHTFGNRFLTNHPDSRAILYENNTYSKRKILDLINTIQGFEKAQEIM
GLFEGCTQPLIKKLTHHPPEGKLVDVTGLLQYFREAFDQNVAVNQGKIIPQKGIEEDYDG
VEQEIADISSRSSDYLEDLKQMFRCEVSYVGKDNKRFQIEIPENRTHKVTNEFQLEGARK
GFKRYSTATSKGILVDMIRAETKRNKIVQDLNRRIFEKFSDSRVKWEQVIHCLMMLDVLC
GLAEYGKNVSRTTCFPNVLPFQERGFIDIKDGVHPNIQLEDFVPNSTQLGIEGKAKIMLL
TGPNMGGKSTLMRQVALIIIMAQMGCPIPAASCTFTLVDRIFTRFGAYDDILKGQSTFFV
ELSEASSILRHATRNSVLFLDELGRGTSTHDGNAIATAYVKKLIGMECRTIFSTHYHSLV
DFYSGYENIQLGHMACMTEEQEEDDPMMSVTLLYQLKEGNCPKSYGFNAAKLAGLPKEII
ASAHKIATELETVTKQKKMLRALLLSRNADFVRKTLRAVF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgttcgagtctagggcagtcgaacaccctttttaactatttccagtctcct
ggcaataaatcatctgctaaaaaacagaatggaaactctacaaaggagtctaacctaatg
ggttctggtagtgacaacgaagatgatacgccggttctggcgaggaaaagaaatcgtacc
gctcttttcgatagcgattccgacacagaaacttcggttcccgaagtaaagacaaagaag
aagcctaaaattgcaaaggaggaaggcagtcttcagttgttcacgtttgaaaagtcaaac
aggtcgctgtcgcgagatgacaatgtcaacagtctcgcatcggacacgcagtggtttcac
gaacgtctcgaatttttgaaaccggacaaaatacgtgacatcaacggtaatcggtccgat
catcctgattacgatgagaaaaccctttacgtgccccaagagttccttaataaacaaacg
ccggcaatgcgtcaatggtggattttaaaaagtaaacattatgataccgttctatttttt
aaaatcggcaaattctatgagttctatcacatggatgcagtgatcggcgttaattatctc
aacttctctttcgtcaagggtggcgagtttgcacattccggttttcctgaggtggcctac
ggacgtatggcgagcacgctgatcgagcaaggttttaaggtggcaagagtcgagcagact
gaaacaccggagatgatgaatgatcggtgcagagggcacaaggtgacgaaatacgatcgg
gttgttcggcgtgaaatttgtgaaataaccacccaggcgacgtgtttgtacggggcacag
atgactgatgcgaagcagtcgctgtcctgctacctcttggcgattgcggagaagccgata
aacggagggagtgccttcggcgtttgctttgtcgacacatcagtgggggacattttctta
ggacaatttgaagacgacaaacattgctcacgtctcttaagaatattcgcacagtatcgg
cctgctttgatattactcgaacgccgtggttttcaatggtcaacactcgaagtattgaaa
aaaaccatcagcagtgtcaaacgagacgtactaacctcaggcacacagtttctctctcca
gaaaagaccatagatctcttgatgaaggaatgctattttcgtgacaaaaacaatgacttc
gaatggccgacggttctcgccgaattcgtcgacggacatctaccgaagctgggttgcgag
ctggctcttaaagcgttaggggcctgcgtgtggtatttgaaagactcggagttagatatt
aaagttttatctatgaagaagttccatatttataaaccggccgatcaaacaagcgataag
gcacttgatcggcaagcctttatgattttggactttataacaatcgaaaatctgaacttg
ttaggtgagaaaggcacgctgcagaagactctggattattgtgaaactagctttgggaaa
agacttctgcagcagtggatttgtcgtccgttatgtcaagaacacaaaatacaagaacga
caaaacgcgatccaccagttgtgcgaaaatgacgaagttcgccaggcagtacgcgccatc
ttcagaaagcttcccgatttggaacgtctcgtttctaaaattcatacattcggaaaccga
ttcttaactaatcaccccgatagccgcgccatcttgtacgaaaacaatacttattcaaag
cgcaaaattttggatttaatcaacaccatacaaggttttgagaaagcccaggagattatg
ggtctcttcgaaggatgcacgcagccgctaatcaagaagttaacgcaccatccgcccgaa
ggcaagcttgtggatgtaactggcctgctgcagtatttcagggaagcgttcgatcaaaac
gtcgcggtaaatcaaggtaaaattattccccaaaaaggcatagaggaggattacgacggg
gtcgaacaagaaattgccgacatatcgagtcggtcgtctgattatctggaggacctcaaa
caaatgttccgttgcgaggtatcctacgtgggtaaagataacaaacgttttcaaattgaa
ataccagaaaacaggacgcataaggtcaccaatgaatttcaattggaaggcgcgcggaaa
ggcttcaaacgttattctactgcaacttctaagggcatcttagtcgatatgatacgtgcc
gaaactaaaaggaacaaaatcgtacaagacttaaacaggcgaattttcgagaaattcagc
gacagccgtgttaaatgggaacaggtcatccattgcctgatgatgctcgacgttctatgt
ggcctcgccgagtatggcaaaaacgtttcgagaacgacatgtttccccaacgtcttaccg
ttccaagagcgaggtttcattgacattaaggacggcgtccatccgaacattcaactggag
gattttgttccaaacagcactcaattgggcatcgagggtaaggcgaaaattatgcttcta
accggtccgaatatgggtggcaaatccacgctgatgcggcaggtcgctttaataattata
atggcgcaaatgggctgtcccattccggcagcgagttgcactttcacactggtggatcgc
attttcacacgttttggcgcatatgacgatatcttaaaaggacagtcgacatttttcgtt
gaattatcagaggcgtcctcaatattgcgacacgcgacacgcaattctgtgctcttcctt
gacgaactcgggcgcggaacgtcgacgcacgatggaaacgccatcgcgacggcatacgtg
aaaaaactgatcggcatggaatgtcgcacgatattttcgacgcactaccactcgctcgtc
gacttttacagtggttacgaaaacattcaactgggacacatggcctgcatgaccgaggag
caggaggaggatgacccaatgatgtccgttaccttactctaccaactaaaggagggaaat
tgtccaaaatcgtacggattcaacgcagcgaagttggcgggattacctaaggaaataatc
gcctccgcgcacaaaatcgcaaccgagctggaaactgtgacgaaacaaaagaaaatgctg
cgagctctgctgctttctcgcaatgcagatttcgtacgaaaaactttacgagcggtattt
taa
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