Photinus pyralis (common eastern firefly): 116162135
Help
Entry
116162135 CDS
T07438
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116162135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116162135
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116162135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Beta-prop_RIC1_2nd
DUF2252
Motif
Other DBs
NCBI-GeneID:
116162135
NCBI-ProteinID:
XP_031331534
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MSLTDYLKLNKHKLFENLRKSLPASIIKTQNVLTINDGVLFVWDFQDNCVLTLNVKAVHS
RNDETVPHQILLPTVSSRFAVELLRANSSNTLLVVAGGSGVLVLELPERCPPHGNFSNNK
EIVYCRSHSLDEHLLLSNPSIEVRQVRFHPASPNQTHIMVLTSDNALRLYNIENSSAVAL
GVYAVGKRPKGVMPGSKAFFLGLFGETAVDFDFGPPEVDDPSSDGVEEESLGKSALDIAN
EDDGDEESAILRKFKDMKLRGTIIKNTARSLKWPIFLLDGLGSVFVLIISLNDGDTPKVK
GPLPTWPSYDQSYTNDACAILCHPSTPPILSIATINGNISHSIVLPFDEKSDQLRRCKSL
TSSLDVPDRAIYTFETLELELGLATTDALSDYCCPVFLHMDESRSGHYFATHEAGVHAIS
IPVVENITQILNGPDDENFMEQLVNEASTVEYVVCTKTATSNKINPVIGFSIYYNPPSMV
ALLGNGQLISMLLLSFTSLPCTYDFLPEDIENFKSPLKKMLSEPFDVQIYKILKQAASQP
ILKLNNSENHSQQECYELLQRAAQVFREEHFKYYEKAREEIEKRIKVLQMLKNFQTTEIQ
KLIKEKQNLQTKAESLAEKYEDIKDKQELLKNRCEKLLIMALQTKSEPSEAEQRFVKELK
NAQKKVEMFTTSINKLKNQSKYQEVQMANWQREQSKRESGLASIQSQTIKTNLQDMTDQI
SAMMSEITEYKKKLGLN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaccgactatttaaagttaaataagcacaaactattcgaaaatttacgcaaa
tccctaccggcgagtattatcaagactcaaaatgtgttaacgataaacgacggcgtgcta
ttcgtttgggattttcaagacaattgtgttctaaccttaaatgtgaaggctgtgcattcg
aggaacgacgaaactgtccctcatcaaattcttctaccgacagtatcttctcgattcgcc
gtcgaactgcttagggcaaactcttcaaatactcttctggtggtcgccggtggaagcggc
gtgctcgttctcgaactgcccgaaagatgtccgccgcacggaaacttctcaaacaacaag
gagatcgtgtattgcagaagtcacagcttggacgagcatttactcttgagcaatccgagc
atcgaagtccgccaggttcggtttcaccctgcgagtccaaatcaaacgcacatcatggta
ttaacgtccgataatgcgctaagattatacaacatcgagaactcgtccgccgtcgcactc
ggcgtttacgccgtcggtaaacgtcccaagggcgtgatgcccggcagcaaggcgttcttt
ctcggtctgttcggtgaaacggcggtcgactttgatttcggccctcctgaagttgacgat
ccctcgtcggatggcgtcgaggaggaatcgctcggtaagagtgctttagatattgccaat
gaggacgacggggatgaagaaagcgcgattctgcgcaagtttaaagatatgaaattgcgt
ggaactatcatcaaaaacactgcgaggagtttgaaatggccgatttttctactggatggt
ctgggctctgtgttcgtgctgatcatcagtcttaatgatggggatactccgaaagttaag
gggccactgcccacttggccatcttatgatcagtcctacacgaatgacgcatgcgcaatt
ttgtgccatccatctacacctcccatactttccatcgctacaatcaacggaaatatttca
cattcaattgtcttgccttttgatgaaaagagtgaccagctgaggaggtgcaaatcactc
acgagcagtttggatgtccctgatcgtgcgatctacacatttgaaacgttagagttagaa
ttggggttggccactactgacgcgttaagtgattactgctgtccagtgtttctccatatg
gacgagtctcgttcaggccactactttgccactcacgaagcgggtgtgcacgccatttcg
attcctgtcgttgaaaatattactcaaatacttaacggaccggacgatgaaaattttatg
gagcaattagtaaatgaagctagcactgtggaatacgttgtatgcaccaaaaccgccacc
tccaacaagatcaaccccgtaattggcttttctatctattacaacccgcctagcatggta
gcgctattaggtaacggtcaattgatcagcatgctgctactatccttcacatcactaccg
tgcacttacgattttttaccagaagacatagaaaacttcaaatcgcctttaaaaaaaatg
ctaagcgaacctttcgatgtgcaaatttataaaattttgaaacaagccgcttcgcaaccc
atcctcaagttgaacaacagcgaaaaccactcgcaacaggagtgttacgagctattgcaa
cgcgccgctcaggtattcagagaggaacactttaagtactacgaaaaagcgcgagaagag
atagagaaacgcatcaaagtgttgcagatgctcaagaatttccagaccaccgaaatccag
aagctgataaaagagaagcaaaatctccagacgaaagcggaaagtctagcggaaaagtac
gaggacatcaaagacaagcaggagctgctcaagaaccggtgcgaaaagcttctaataatg
gcgcttcagacgaaaagcgaaccctccgaagccgagcaacgattcgttaaggaacttaag
aacgctcagaaaaaggttgagatgtttactacgagcataaacaagttgaagaatcagagc
aagtaccaagaggttcagatggcgaattggcagagagaacagagcaagagggaaagcgga
ctggcttccattcagtctcaaactatcaagacaaacctgcaggatatgaccgatcaaatt
tcggcgatgatgagtgagattacggaatataaaaagaagttaggtttaaattag
DBGET
integrated database retrieval system
