Photinus pyralis (common eastern firefly): 116162451
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Entry
116162451 CDS
T07438
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116162451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116162451
03012 Translation factors [BR:
ppyr03012
]
116162451
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116162451
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116162451
Translation factors [BR:
ppyr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116162451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
116162451
NCBI-ProteinID:
XP_031331930
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MELNLDISTYTKFENLDASIEQCDQVETPPETENLSGSFTSLRLDGQVQVLPPVRNINEQ
QYRHLLPTWSKRDEFLTTVSQHSTTAVISEPGSDRSTQFPQYILEQMRAERRPCKIIFSQ
PHRLVAFALAERVSMERGEALGNTVGYQMPLESSYGLSVALTYCTNAILMKTLMNRHPDY
FLQVTHIFVDDIQDEDKFLLRCLKSLHHHHGSLKIVLMGYKSHVERAQFFFDDIGEVHVP
GRQGGLKPLYLAEILKEISLPFGCDDHYDPGQINYELIAKLIDLIFHGNRGTTLVILPSY
EEIVACRESLIKMITFDLNHLQFVTLHSNMSIHEYQNARKSIRDMFQVILAESFVESGCV
ALDIVYVIDCGREVRRVYNNATRTTDFNCGWITREQSNQRAAIGNNQLCFHLCAEECLDL
AAEYDGPPLHEICLQASNLQCEFYNVSEYFAFTFRNAVPDLIRLGAMNKRGKITPLGRML
AQFPCEPRLAKMLCYGVVLKCLDPVLSIVAFLFYKNPFQDQALEREGLDVVLGMAGNHLS
DHLVLLRMFQQWQNRKAKHTTCNSNNFVNWHIVEVVHQFRTQFLSQLRGLGFVTTYGDNA
IKEVNVNSSNWALIKTALAAGYTGRIMTSEQEIKYGKYSALTANAVSNLGRQVCVIYEKL
DNNKVDVASVVTPITVALVDHSVRMKPLTASRSCDDVLHAFSNIIHFSYLFREVIAKKIC
SPFLKLNNFEARILQYGCKIISDEEVEVFGNGPSCVGTVPKSFSNLIPKSAVQLVMAPPF
RATEERASVYFVIKPPSLEVIPRTATSSNWRFAPKTEKRMFPHFRNGRDVILFFTADKFD
YFQGIAQLTETNNGDVTQPCRILWLSSVRVSFDLIKQQKIRNSFNDHKLVCNAEDGDEVE
FWCAQKFRALFYN
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaacttagatattagcacgtatacaaaattcgaaaacctcgacgcctccatc
gagcaatgcgaccaagtggaaacccctccggaaacggagaacctgtccggatcattcact
agtttaagacttgacggtcaagtacaagtgcttccgcccgtacggaacattaacgaacaa
cagtatagacacttgctacccacctggtctaaacgtgacgaattcctaacgacagtttcc
caacattcgacgacggccgtgatttccgaacccggttcagatagaagcacacaattccct
cagtacattttggagcaaatgcgtgccgaaagacgtccgtgcaagattatcttttcgcaa
ccgcaccgtttggtcgcattcgctctagccgagagggtgagcatggagcgtggtgaagct
ttagggaacactgtcggatatcagatgcctctagagtccagttacggtttaagcgtcgcg
ttaacgtactgtaccaatgcgatactgatgaagactctcatgaaccgtcacccggactat
tttctgcaagtcacgcatatattcgtcgatgatattcaagatgaggataagtttctgctt
cgttgtctcaaatcgttacaccaccatcacggtagtttaaagatagtactaatgggatac
aagtcgcacgtggaacgtgcccaatttttcttcgacgacatcggcgaggtgcacgtgccc
ggtcggcagggaggattgaagccgctgtatcttgccgaaatcttgaaagagatatcctta
ccttttggatgcgacgatcactacgaccctggccaaatcaactacgagttgatcgcgaag
ctgatcgatttgatttttcatgggaaccgaggaacaactttggtcattttgccaagttat
gaggagatagttgcctgcagggaaagtctgattaagatgatcacattcgacttgaatcat
ttacagttcgtcaccctacactccaatatgtctattcacgagtatcaaaacgcacggaaa
tcaatccgagatatgtttcaggtcattttggcggagagctttgtggagagcggatgtgtg
gcgttggatatcgtttacgtcatagactgcggaagggaagtacgcagagtttacaacaat
gcgacgcgcaccactgactttaactgcggttggattacccgagagcagtccaaccaacgc
gccgcaattggcaataatcaactttgcttccacctgtgtgcagaggaatgtctcgatttg
gcggcggaatacgatggtcctccgcttcacgagatatgtttgcaagccagtaatttgcaa
tgcgaattttacaatgtctccgagtatttcgcctttacattccgcaatgcagtgccagac
ctgattcgcttaggcgccatgaataaaaggggaaaaattacacctttgggaaggatgctg
gctcaatttccctgcgaaccgaggctggcaaaaatgctatgctatggtgttgtgcttaag
tgtttggacccggttcttagtattgttgcttttcttttttacaaaaatccatttcaagat
caggctttagagcgagagggcttggatgtggtacttggtatggcagggaaccacttaagt
gatcatctggtcttacttcgcatgttccagcagtggcagaataggaaagctaaacacaca
acttgcaactctaacaattttgtgaattggcacatagtggaagttgtacatcaatttcga
actcaattcctctcccaattacgtggactaggatttgtgacgacctatggcgacaacgca
attaaagaagtcaacgtaaactcctcgaactgggctctgatcaaaacggcgttggcagct
ggctacaccggacggattatgacaagcgagcaggagatcaagtatggtaaatactccgct
cttactgccaatgccgtttccaaccttggtcggcaagtctgtgttatctacgagaaattg
gacaataacaaggttgacgtagccagcgtagttacgccgatcactgtggcattagtcgac
cacagcgtgcggatgaaacccctaactgcctcgcggagttgcgacgacgttctacacgct
ttctctaacataatccacttttcgtacctttttagggaagtaatcgccaagaaaatttgc
agcccatttctcaagctaaacaattttgaagcgcgcattcttcaatacggctgcaagatt
atttctgacgaagaagttgaggtttttggcaacgggccaagttgtgtgggaaccgtacca
aagtcgttttctaatcttatcccgaaatcagccgtacaactcgtgatggcgcctcccttt
cgcgccacggaagaacgggcatcggtttactttgttattaaaccgcccagcttggaagtg
ataccgcgcacggcgacgagttcgaactggcgttttgcgccgaaaactgaaaagcgcatg
tttccccattttaggaatgggcgcgacgttattctcttctttaccgccgacaagtttgat
tattttcaaggaatcgcacaattgaccgaaactaacaatggggatgttacccaaccatgt
cgcatactgtggttgagcagtgtgcgagtcagttttgacctcataaagcaacaaaaaatt
cgcaactcattcaacgatcacaagcttgtatgcaatgcggaggacggggatgaggtcgaa
ttttggtgtgcccaaaaatttcgagctttgttttacaattag
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