Photinus pyralis (common eastern firefly): 116162550
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Entry
116162550 CDS
T07438
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116162550
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116162550
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116162550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
DEAD
HA2_C
ResIII
AAA_22
nSTAND3
Herpes_ori_bp
AAA_19
AAA_7
Rad17
AAA_16
ATPase
AAA_25
Cas3-like_C_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
116162550
NCBI-ProteinID:
XP_031332047
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MHRRDSYSKYKEDRRHPSRKRRRSPSPQASSSSKEKPPDLQAIININRHHFSSFLQNHLN
VGNADDFWKFFEKYQTIQAHSTDSANFDKTNLLNVNFDRSPAQLYNKLPVNVPEACFAKF
LNSVLVYQDFQQKSKFSKLRKLRRAQSDLPIAQYKRVLIEMLERNRVVLVAGDTGCGKST
QVPQYVLEAGYKKIVCTQPRRIACISLAKRVAYETLTDYKTVIGYQIRFEKTKRADTSVV
FMTEGLLLRQTAEEETINAYDVIILDEIHERHLYGDFLIGIMKCLLHKRDDFKLILMSAT
INIELFKSYFQEEEIGVIEVPGRLYPIDVQYLPIIYDSYKQKRDRFDCSPYLRVIHMIDA
KYQPHQKGDLLVFLNGFAEISALADAVNEYGQIKQNWIVLQLHSSLSLEEQDKVFDYAPE
GMRKCIISTNIAETSVTIDGVRFVIDSGKVNKMIYNNVGGINKLTETNISQDSAKQRAGR
AGRTGPGICYRMYSEETFRSFDPFTVAEIHLVPLEALLLNMISLGLSDIQNFPFLEKPSA
SAIEESVDKLKFCGALKLDEDYLVLTTLGESLSKLPVDLTIGKMLIMSTLFGNVNSVLAL
AAVLSVQSPLTQQAYRNLDTQNARKTLESNHGDPISLLNMYKEWLCVKQDTVPMERQPKE
NSRTWAKKRGLEEQRFYEVTKLIQQFREILEDAELLSKRAQGELSSGERSMRYGELKQLK
TLRRNLKNEGRSAQRKQLKFQRFDVETDDREAGGKLDLRDIEFRITNDFKKLQTLLDDSS
PESFRDLMMLKLILTSGLYPQVAVEDEHNYSKSVAERLYHTKSKNFVFLRPLSCFTTNPE
VLEIHADDIDVPPPGYFSKRPISRKHQLLVYQSILETKKVYLMNVMRMPAIQTLMLFAKT
IATNLTLTKFVFDEFLLCDVPAFGQGKTLLLRAVQLRKKLKEKLEEKLGDVSAKCDQRDA
FYFIEDLVKFMTTDVSYNIKRLLPADLKVIYTDECFPSPDSNPFDSEYRATQNSAYGGLQ
VTENVVYGCLVQEEWACMIEQQISTMTYTCASCGGEMAGVSVLNIMQHEASCTVSKAEQR
AETVAEPVVVKANSQQYYCDKCDKTLMLAPIDILKHKRSCN
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtcgagattcttattctaaatacaaagaagaccgtaggcatccttcaagaaaa
aggcgaagatctccttcgcctcaggcatcctcgtcttcgaaagagaaaccaccagacttg
caagcgattatcaacatcaacaggcaccatttcagctcgttccttcaaaaccacctgaac
gtaggaaacgcggacgacttctggaagttcttcgagaaataccaaacgatccaggcccac
tcgacggactccgcgaacttcgacaaaacgaatctcctaaacgtcaacttcgaccggtcc
ccggctcagctgtacaacaagctgcccgtcaacgtacccgaagcgtgcttcgcgaaattc
ctaaactcggtcctcgtctaccaggactttcagcagaaatcgaaattttccaaattgaga
aagctccgcagggcacagtcggatctgccgatcgcgcagtacaagcgcgtcctgatcgaa
atgctagagcgaaatcgcgtcgtgctggtcgccggcgatacgggttgcggtaaatcgacg
caggtccctcagtacgttctcgaggcgggctacaagaagatcgtgtgcactcagccgcga
cgtatcgcgtgcatctcgctcgcgaaacgagtggcgtacgagacgttaacggattataag
acggttatcggttaccaaatcaggtttgagaagacgaaacgcgccgacacgtcagtcgtt
ttcatgaccgaaggtctactgctccgacaaaccgccgaagaggagaccatcaacgcgtac
gacgttatcattttggacgaaatacacgaacgccatctgtacggggactttctgatcgga
ataatgaagtgcctgttgcacaagcgcgacgatttcaagctaattttgatgtcggcgacg
attaacattgaactattcaagagctacttccaagaggaggagatcggcgtaatcgaagtg
ccgggccgactgtacccgatcgacgtccagtacttgccgatcatttacgactcgtacaag
cagaaacgggaccgtttcgattgcagcccgtaccttcgggtaatccacatgatcgacgcg
aagtaccaaccgcatcagaagggcgatctgctggtgtttctcaacgggttcgccgagatt
tcggcgctggccgacgcggtgaacgagtacggccagatcaagcagaattggatcgtgctc
cagttgcacagcagtttgtcgctggaggaacaggacaaggtgttcgattacgcgccggaa
ggcatgcgaaagtgtatcatctcgaccaacatcgccgagacttcggtgacaatagacggg
gtccgattcgtgatcgattcgggtaaggtgaacaagatgatctacaacaacgtgggcggc
atcaacaagctgaccgagacgaacatctcccaggacagcgcgaagcaacgcgccgggcgc
gcgggccgcaccggccccggcatttgctaccgaatgtactcggaggagacgttcaggtcg
tttgacccgttcaccgtcgccgaaattcacctcgttccgctagaggcgctcctcctcaac
atgatctcgctgggactgagcgacatccagaactttccgttcttggagaagccgagcgcc
agcgcgatcgaggagagcgtcgacaagcttaaattctgcggcgccctaaagctcgacgag
gactatctcgtgttaactactctcggcgagtcgctcagcaagctgcccgtcgacttgacc
attggaaaaatgctgataatgtccacgctgttcggcaacgtgaactcggtgctcgcgctc
gccgctgttttaagcgtgcagagtccgctcacgcagcaggcctaccgcaatttggacacg
cagaacgcgaggaagaccttggagagcaatcacggagatccgatatcgctactgaacatg
tacaaggagtggctttgcgtcaagcaggacacggttccgatggaacggcagccgaaggag
aactcccgaacttgggcgaagaagagaggtctggaagaacaacgattttacgaggtaacg
aaactgatccagcaatttcgggaaatcctggaggacgccgagcttttatcgaaaagagcg
cagggcgagctttcgagcggcgaacgttcgatgcgctacggcgaactgaaacagctgaag
acgctcaggcgcaacctcaaaaacgagggtcgcagcgcccagcgcaaacagctcaagttc
cagcgcttcgacgtagagaccgacgatcgagaggccggcggcaagctcgaccttcgagac
atcgagtttcgcatcacgaacgacttcaaaaagctgcaaactctcctggacgactcctcg
ccggagagcttccgggacctgatgatgctcaagctgatactgacgagcgggttgtatccg
caggtcgccgtcgaggacgagcacaattactcgaagagcgtcgccgagcgactgtaccac
acgaagagcaagaacttcgtcttcttacgtccgctgagctgtttcacgaccaatcccgaa
gtgctcgagatacacgcggacgatatcgacgtgccgcccccgggatacttcagcaagcgg
ccgatcagccgaaagcaccagctgctggtttaccagtcgatactggagactaagaaggtg
tacctgatgaacgtgatgaggatgccagcgattcagacgctgatgctcttcgcgaagacg
atcgccacgaatttgacgctcaccaagttcgtgtttgacgagtttcttctgtgcgacgtc
cccgcctttgggcagggcaagacgttactgttgcgcgcagtacaactgcgcaaaaaactg
aaggagaaactggaggagaagctcggggatgtctcggcgaagtgcgaccaacgcgacgcc
ttctacttcatcgaggacctcgtcaagttcatgacgaccgatgtcagttacaatattaaa
cgactattacccgcggacttaaaggttatatacacggacgaatgctttccgagcccggac
tcgaacccgttcgactcggaatatcgcgcgacacagaacagcgcgtacggcgggttgcag
gttaccgagaacgtcgtctacggctgcttggtgcaggaggagtgggcgtgcatgatcgaa
cagcagatttcgactatgacctacacgtgcgcgagttgcgggggggaaatggcgggggtg
tcggtgctgaacattatgcaacacgaggcgagttgtacggtttcaaaagccgaacagcgg
gcagaaacagtagcggagccagtcgttgttaaagcaaactctcaacagtattattgtgat
aaatgtgataaaacgcttatgttagctcctattgatatattaaagcacaaaaggtcgtgc
aattaa
DBGET
integrated database retrieval system
