Photinus pyralis (common eastern firefly): 116163532
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Entry
116163532 CDS
T07438
Name
(RefSeq) collagen alpha-1(XI) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116163532
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppyr00536
]
116163532
Glycosaminoglycan binding proteins [BR:
ppyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116163532
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
116163532
NCBI-ProteinID:
XP_031333373
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MDWRKKYKTDTILRLAFVIATLYTCTSTTLAVSDNIVDFIEKADLWDEPEGILRIVGRCA
DYIPEGRDPPRSEWAYRFGSRAQISLTAQQIFPNGFPKDFSILLVIRPSSGQMSPLFTIY
NDEGEEQLSITVGRDISIYYEDFEDIPDEGTFISFGKSIDDGEWHRVAISVKGDSVTATI
DCTTTITRELARSSTSTIDTTGIITIGYELSDEGYYNGDLQMLKIAHTPDEAYEHCTQHA
PNCLSMYNKGTFDNTQHSYRHESGANLNTNMGPINSGTTHYQTITGSTYPTGNSHFKQFN
GGTSSHQSGTFLRGGGKISFNHTGGDGGSGSFVQGNIAGGSNAQQTTGSSQAGVSLSQNT
YASLGQDTAHSAVERILGPIRVSETGSFHQASGGRSENRVTTSGGTNSMNIGATLITDSA
PGRGEGVSFHQSGGSSATGVTDAILGGLSIHHIDGTSHHNAGSMSETKINNIHISQPQVH
SSHPNGILVNKTFMNSVITTGIASHNSSEEQPEIVFSFDADALSETHTNGDVNINFGEET
LEEPDLSVFRNSSVSFEEDNNENGNSEPDNEPSGNSHSETETTHDTRYPYYVNVGQPGVR
GYPGPAGPVGPPGPKGDSGRDGIPGTIGTPGPPGHVFMIPLNNQGNEKGPDVQAESFRQM
LSQHMMAMRGVEGPMGLAGLPGPSGPRGPEGTKGEPGDVGEPGPRGERGPTGLPGREGRR
GKPGRDGERGLTGPPGAKGEQGLIGLPGLPGDKGERGAVGATGEPGLTGHDGLQGEEGPP
GLPGLTGEMGPRGFTGPRGIPGLPGNPGIPGIEGPPGPKGNSGPTGQPGSSGQPGPPGPV
GSPGPQGMLGPPGIMGPQGKPGLPGLSGSEGAPGHPGTPGTAGSKGEHGPPGPLGPIGFP
GSRGVKGDEGKRGSAGEKGDKGERGIDGEKGDSGGKGEQGLPGPHGIPGLEGPEGPKGFD
GPRGETGVIGPPGEKGKMGIPGFAGYPGGPGDKGDKGSYGKVGPTGDKGDRGNPGTTGER
GETGPRGFRGSRGKRGAEGTPGPKGDTGQPGPPGVQGDQGSQGAEGPRGFIGLPGPTGLN
GKDGLPGPHGERGPPGESGSQGAPGAPGVIGPVGPAGERGPIGESGIPGSPGHPGEPGVP
GDSGKEGAPGLPGPPGKPGPQGAVGAAGFPGERGPAGLPGIPGLKGELGPPGPHGHAGDK
GAQGGVGHDGSPGPEGRVGPVGPAGPVGAKGERGGTGPPGPGGRDGLPGQRGLPGPPGPI
GSPGEDGDKGEIGPPGEKGFKGAKGESGPMGSSGSQGLRGEPGSVGPPGEKGLPGEIGRQ
GIKGEDGPDGTTGPAGPQGLQGLPGPAGLKGEIGDIGLVGPVGPAGPPGEPGIRGGKGIE
GVTGPPGPEGPQGQKGDSGMPGISGSPGIEGKPGEKGSLGSKGDEGKMGHQGAPGPRGVV
GPEGPKGSAGPPGFPGPPGVPGEIGPKGEPGKEGADGKQGDAGEPGEAGPPGKVGPAGSP
GKQGPEGPAGFQGNTGLPGDKGDKGVPGPIGLQGPVGPQGVPGTQGVAGPRGSPGPAGDV
GPPGKAGGDGLPGKTGETGPKGEKGERTRRGMKGHRGDIGPPGIKGEMGEKGEPGPKGPI
GPEGKKGEIGPIGNIGLKGNDGPPGPMGIEGPTGLKGLLGPTGVKGEAGPPGPPGPPGPP
ADMPLLPPELLFQQELSRSRRSVESLINDFEKDLKYINPQIAGQNKLRDEDLKFLDMYNS
IYSMRQDLDRIKKPLGTKENPARSCKDLFYGHPQYLNGWYWIDPNSGMPDDAIYVYCDLS
NGGETCVPPDVHSAHMPNIPWRKEGNSNNWYSNLRGGFKITYETVGVVQMTFLKLLSQDA
YQNFTYSCINGVAWYNSKTMNNDLSIKLLGENEQEFSNTAIKPNVLIDGCKTRTTKSETI
FEIRTKKLSQLPIVDFYPVDYGSSNQAFGFLVGPVCFK
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggattggcggaaaaaatataaaacagacacaattcttagattagctttcgtaatagcc
acattatacacatgtacctcaacaacattagccgttagtgataatatagtggatttcatt
gaaaaggctgatttatgggatgaacctgagggtattttaaggatagtaggaagatgcgcc
gattacataccagaaggaagggatccgccgcgctcagaatgggcctatagatttggaagt
cgtgcgcaaatttcacttacggctcaacaaatatttcccaacggatttccaaaagacttt
tccattttattagtgattagaccgtcgtcaggtcaaatgtctcccctgttcactatctat
aacgatgaaggtgaagagcagctatctattacagtaggaagggatattagcatctactat
gaagactttgaagatattccggacgaaggtacttttatttccttcggtaaatctattgac
gatggagagtggcatcgtgttgcgatcagtgtaaaaggtgattccgttactgcaactata
gattgtacaacaacaatcacacgcgagttggcccgttccagtacatcgacaattgacact
actggtataatcaccattggatacgaactttcagacgaaggatattacaatggcgatttg
caaatgttaaaaattgcacatacacccgatgaagcttacgagcactgcactcagcatgct
cccaattgtttaagtatgtataacaaaggaacatttgataacactcaacattcgtataga
cacgaaagcggtgctaacctaaacacgaacatgggtcctataaatagtggaaccacacac
taccaaaccataacgggttctacatatccaacgggtaattcacactttaaacagttcaat
ggcggtacatctagccatcaatcaggaacctttcttcggggaggaggaaaaatatcattt
aaccatacaggtggtgatggtggttccggcagttttgtccaaggaaatattgctggaggc
agtaacgcacaacaaactactggttcttcgcaagcaggtgtatcacttagtcaaaatact
tatgccagtttaggacaagacactgcacattctgccgtggaacgtatactgggccccata
cgcgttagtgaaacgggttcatttcaccaagctagtggtggccgttcagaaaatcgtgtg
acgacctccggtggaacgaacagtatgaatataggcgcaactcttataacggactctgcg
ccaggaaggggcgaaggcgtctcttttcaccagagtgggggtagtagtgcaactggtgta
actgacgctatattaggtggtttatcaattcatcacatcgatggaacgtcgcatcataac
gctggaagtatgtcagaaactaaaataaataacatccacatttcgcaaccccaggtacat
tcgtcccatccgaatggtattttagtcaataaaaccttcatgaattcagtaatcactact
gggatcgcatctcacaattcaagtgaagaacaaccagaaattgttttctcattcgatgca
gatgcgttatctgaaacgcatactaatggcgatgtaaatataaactttggagaagaaaca
ttggaagaaccagatctctctgtatttagaaactcgtcagtatcattcgaagaagataat
aacgaaaatgggaacagtgagccagacaacgaaccaagtggcaattcgcattcagaaact
gaaactactcacgataccagatacccttactatgtgaatgtagggcagcctggtgtcagg
ggttatccaggacccgctggtccagtgggtccacctggtccaaaaggtgactccggtagg
gatggcataccaggaacgataggcaccccaggaccaccgggacacgtctttatgattccg
ctgaacaaccaaggaaatgaaaaaggtcccgatgtgcaggcagaatcgtttaggcaaatg
ctttcgcaacatatgatggcgatgcggggtgtggaaggacctatgggattggcaggtctt
ccgggtccttcgggtccaagaggtccggaaggaacaaaaggtgaaccaggagatgtcggt
gaaccgggaccaagaggtgaaagaggtccaacgggccttcccggtcgagagggtcgtaga
ggaaaacctggccgcgatggagaacggggactaacaggtccaccaggagcaaaaggggaa
caaggattaataggattgccgggattgcctggagacaaaggagaaagaggagctgttggc
gcaaccggagaacctggattaacaggtcatgatggactacaaggagaagaagggccacct
gggttacctggactaacgggagaaatggggccacgtggatttaccggtcctcgtggtata
ccaggtttacctggcaatccgggtattccgggcattgaagggccacccggcccgaaaggt
aatagtggacccactgggcaacccggttcttccggacaaccagggccgccggggccagtt
gggtcacctggcccacaaggaatgttgggacctcctggaataatggggcctcaaggtaaa
cctgggttacctggtctatctggttctgaaggtgctccaggacatccaggaacgcctgga
accgcaggatcaaaaggagaacatgggcctcctggacctctaggtcccatagggtttccc
ggaagtcgtggggttaaaggcgacgaaggaaagagaggatcagcgggagaaaagggcgat
aaaggcgaacgcgggattgatggagagaaaggcgattcaggtggaaaaggagagcaagga
ttgcctggcccgcatggaatacctggattagaaggacctgaaggtcccaaaggttttgat
gggcctcgtggagaaacaggtgtgattggtccaccaggagaaaaaggtaaaatgggtatt
cctggttttgctggttatcctgggggacctggggataagggcgataaaggtagttatgga
aaggtcgggccaacaggtgacaagggcgataggggaaatcctggaacgacgggagagagg
ggcgaaacagggccacgaggatttcgaggatctagaggaaaaagaggagctgaaggcacc
cccggtcctaaaggtgatacaggacagcccggtccacctggtgttcaaggagaccaaggc
tcacaaggtgctgaaggaccgagaggtttcattggattaccaggtcccacggggcttaac
ggtaaagacggtcttcccggtccacatggtgaaagaggacctcctggtgagtcaggatca
caaggagcaccaggagcacccggtgtaattggaccggtcggaccggcaggggagcgaggc
cctattggcgaatctggaatccctgggagtcctgggcatcctggggaaccgggtgtacca
ggagactctggcaaagagggagcaccgggtttgcctggcccgccaggaaaaccaggaccg
caaggggctgttggtgctgcaggattcccgggtgaaagaggtcctgccggattgcccggc
atacccggattaaaaggtgaattaggtccacctggtccgcatggacacgctggagacaaa
ggtgcgcaaggaggagtcggacatgatggatcccctggacctgaaggtcgagtaggacca
gtgggtcctgctggcccagttggggcgaagggtgaacgtggtggtactgggccacccgga
ccgggtggaagagatggattacccgggcaaagagggttacctggcccccctggtccaatt
ggatctccaggtgaagacggagataaaggagaaattggccctccaggagagaaaggtttt
aaaggagcaaagggcgaaagtggtccaatgggtagctccggatcacaaggattgcgaggt
gagccgggttcagtaggtccaccaggagagaaaggcctgccgggcgaaattggtcgacaa
ggaataaaaggagaagatggccccgatggaacaacaggtcctgcgggaccgcaaggtctt
caagggctcccaggcccggccggtttaaagggtgaaataggagatattggtctagtagga
cccgttggtcctgctgggccacctggcgaacctggaattagaggaggaaaaggaattgaa
ggagttactgggcccccagggcctgaaggtcctcaaggccaaaaaggagattccggtatg
ccagggataagtgggtcacctggaatagaagggaaacctggcgagaagggttcgcttgga
tctaaaggagatgaaggaaaaatgggccatcaaggcgcaccagggccgaggggagtggtt
ggtccggaagggcctaaagggtccgctggtcctccaggatttccaggtcctccgggagta
cctggcgaaataggacccaagggcgaaccaggaaaagaaggtgcagatggcaagcaagga
gatgccggagaaccaggtgaagcgggtcctcctggaaaagtaggacccgcaggttcgcca
gggaaacagggtcccgaaggtccagctggttttcaaggaaacactggattacctggtgat
aagggagacaaaggagttcctggacccattgggttgcaaggacccgttggccctcaaggt
gttcctggaacgcaaggtgtagcaggcccaagaggatctcctggaccggcgggagatgtg
ggtccaccaggtaaagccggtggtgatggtctccctggtaaaacgggcgaaaccggtccc
aaaggcgagaaaggggaaagaacacgaagaggcatgaaaggacatagaggagacattggc
ccgcctggtattaagggtgaaatgggcgaaaaaggtgaacctggtcctaaggggcctata
ggaccggaggggaagaaaggggaaattggtcctattggaaatattgggttaaaagggaat
gatggacctccaggtcccatgggtatcgaaggtcctacaggactcaaaggcctattgggt
cctacaggagttaaaggtgaagcaggtccccctggacctccggggcctcctggtccacct
gctgatatgcctttactaccaccagaactcttattccaacaagaattatccagatcacgc
agaagtgtggaaagtttaataaatgattttgagaaagatttaaagtatattaatccccaa
atcgctggacaaaataaactaagggacgaggatttgaaatttttggatatgtataacagc
atatatagtatgagacaagatttagatcgcattaaaaaacctttaggtacaaaagaaaac
cctgcaaggagttgtaaagatctattctatggacatccacaatatttgaatggttggtat
tggattgatccaaatagcggcatgccagatgatgccatatatgtgtattgcgacctatcg
aacggtggagagacatgcgtacctccagatgtacacagcgcccatatgcctaatattcca
tggaggaaggagggaaattcgaataattggtattcaaacttgcgaggtggttttaagata
acatacgagacagtaggtgttgtgcagatgacgtttttaaaattgctctctcaggacgca
taccaaaattttacctattcgtgtattaatggagtcgcgtggtacaattcaaaaacaatg
aataacgatctctcaataaagctactaggagaaaatgaacaagaattttccaatacggca
ataaaaccaaacgttcttatcgacgggtgtaaaacgagaacaaccaaaagtgaaacaatc
tttgaaattcgtaccaaaaaattaagtcaattaccgatcgtcgacttttatcccgttgat
tacggtagttctaaccaagcgtttggtttcttagttggtcctgtatgcttcaaataa
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