Photinus pyralis (common eastern firefly): 116164685
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Entry
116164685 CDS
T07438
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116164685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116164685
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116164685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
DUF3671
Motif
Other DBs
NCBI-GeneID:
116164685
NCBI-ProteinID:
XP_031334746
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MRKWRSRTKSESTNASAATNSNLIDPKPYKDIILSKISCAVTYTMLFHFLFILLYVVIVN
HNFMAPEVWLRSILYSISCFSFWIYILPVVVLIFFKTALSSKSLLTKTNEGSSTLRELIS
GLSVKIIFLVLHIIGGGFVVWLYLSLSEDQYSALYSKCDGHTCMQEGGLFLILNGAWNGL
YFYLRTQSSHKMLLFPVIQQSKFCNFKAEFFTIVNESKWFALYPTIYFTLLYHCLSSIVY
QICLEFGVEIQHQQFGIPLYFLTWVFSTVYVIHANVFEFLFKLFLTEQIRLPLTRTDKNA
PSLADALSLDTVPILQQLASLDLYLLSLWSPERRQMLYALSQPGGHPYTWNQLIDVILML
VNNFTESLNNNMEAISTPDLVRPQNTSTHKNFDATLTTVPVPMKYLNIRSSQTSSIASIA
EIQTNDSLQVQQTIYVRLMKILSDLYGYFKNIGIIKQIFGTSKDAKIQDILKSGQSMELM
ISALGNIVVESVREDPYGVIQRDVPDIIASLFQLKIALERLNKSSILLKKNSSHSSVKLS
NSVYGATKRSLIKICRRFRNYLHEFNLKKETVGQLRSIF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaatggagaagtcgtaccaaatcagagtcaacaaatgcaagtgccgcgacaaac
tctaacctcatagacccaaaaccatacaaagacataatactttcgaagatatcatgtgca
gtgacttatactatgctattccatttcttatttattcttctatacgtcgttatagtcaat
cacaacttcatggcacccgaggtttggttgcgatcgattttgtactcaatttcgtgtttt
agtttctggatttatattctaccggttgttgtgttaattttcttcaaaaccgcactgtcc
tcgaagtctttattgactaaaacgaatgaaggcagttccacactgcgggagcttatttcc
ggtctctctgtgaagataatctttctagtgctgcacattatcggaggtggatttgtggtg
tggctttacttatcgctcagtgaagaccagtatagcgcgttgtattcgaaatgtgatggg
catacttgcatgcaagagggtggtctttttcttattttaaacggtgcctggaatggactg
tatttctaccttcgaacacagtcctcacataaaatgttgttattccctgtcattcagcaa
tctaaattttgtaattttaaggcggaatttttcacgatagttaacgaaagtaaatggttt
gcactgtacccgaccatatatttcacccttctttatcactgtcttagttcaattgtttat
caaatatgtctcgaattcggagtagaaatacaacatcaacagtttggaattccgctttat
tttttgacttgggtgtttagtactgtttatgtgatacatgcgaatgtctttgaatttctg
ttcaaattatttttaacagaacaaatccgccttccacttaccagaacggacaaaaatgca
ccttcgcttgcagatgctttgtcactggacacggtgcctatacttcagcagttagcatct
ttagatttgtatttgttatctttgtggtctccggaaagaaggcaaatgttatatgcactg
tcgcaacctggtggacatccgtacacatggaaccaattgattgacgtaatcctgatgcta
gtgaataattttacagaatcactaaataataatatggaggctatatctacgccagactta
gtgagacctcaaaatacatctacacataaaaacttcgatgcaacacttactactgtgccg
gtgccaatgaaatacctcaatatacgatcgagccaaacctcttccatcgcgtcaattgca
gaaatacagacaaacgattcattacaagtacaacaaacgatctacgtgcgattaatgaag
atactaagtgacctgtacggatatttcaaaaacataggcattattaaacaaatattcgga
acatctaaggatgccaaaatccaagacatcctaaaatccggacaatcaatggagttaatg
atatcggcgctaggaaatattgtggtggaatccgttcgagaagatccgtacggagtaata
cagcgagatgttcccgatataatcgctagtttatttcaattgaaaattgcgttagaaaga
ttaaataaatcatctatacttcttaagaaaaattcgagtcattcgagtgtaaaattgagt
aacagcgtatatggtgctaccaagcgaagcttaataaaaatatgtagacgatttagaaac
tatttacacgaatttaatcttaaaaaagaaactgtgggacaattgagaagtatattctaa
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