Photinus pyralis (common eastern firefly): 116164748
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Entry
116164748 CDS
T07438
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116164748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116164748
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116164748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
116164748
NCBI-ProteinID:
XP_031334825
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MKPATTIRFFNRSEFYTVHGDDASYAAQNLFGTHTVKYMGEQPKLSYLVLSRGNFEKFVR
DLLLVKQYRVEVFVKPSQSKNNDWTLEYKGSPGNLTQFEELLFETNEVIVNSAVMTIKLG
KNFAVALSCIDATEGQFYVSEFNDNELFTELEALIAQISPKECIIQSGDAPELVTLHAVL
QRNQILVTKFKKTEFGTDDVVQDLNRLLYFLKDQERNASGIPEMGLTEAMSCLQAGIKYL
NLAAEESNYNQFKISIYTADRFVRLDSAAISALNLFPKSQSSYNNKTAVHGSLLGVLDKC
CTAQGRRLLAKWVKQPLRDINVINERLEVVETLLQNSELRHMLHSNCLTRTPDLLLWSKK
LTNCKASLQDCYRVYQTVGNVPSIVNVLRKAENTCIKSILIDPICDVLLDMERYQSMIEE
TLDLNLVDRGEYFVVASFNDQLQELTNKKTKIEEKMQKVLRSAASELGFEAGKSIKLECT
EQHGYFFRVTLKEEQALRKNKNFIIIDAIKGGVRFSNNALKQLNSDYMELNTNYEKEQKS
VVKEILEVAAGYGNTVRNLNLHVAKVDVLVSFATVAADSPIQFVRPKMHKEGSGVLSLTK
VRHPCLELQDGLTFIPNDVNFKANEAVFYIMTGPNMGGKSTYIRSVGIAVLLAHIGSLVP
CVEAEISVVDCILARVGANDSEIKGLSTFMLEMVETSSIIKTATSNSLVIIDELGRGTST
YDGCGIAWAIAEYLATKTMCFTLFATHFHEITQLSEKYPTVHNIHVTAVTTEKTITPLYQ
VREGACDRSYGIHCARLAEFPKDVLENAAEHLEQLEGNEMKFIKDFEPSLKCKIVQEGNN
IVKEALANCKNLNLDLSDEELLSQLCSIKNDIEERNLFVKGLLSD
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagctacaacaattcgattttttaatcgttccgaattttataccgttcacgga
gatgacgcctcatatgccgcacaaaacttgttcggcacccatactgttaaatacatgggg
gaacaaccgaaactcagttatctggtgctcagtcgaggaaactttgaaaaatttgtacga
gatttactattggtaaaacagtatcgtgtcgaagtttttgtaaaaccttcccaaagtaag
aataatgattggactttagagtacaaaggatcacctggaaatctaacgcaatttgaagaa
ctgctatttgaaaccaacgaggttatcgtcaacagcgctgttatgaccattaaacttggc
aagaattttgcagttgctttgagctgtatagatgccacagaaggacaattttatgtttct
gaatttaatgataatgaacttttcaccgagttggaagctttaattgcgcaaattagtcct
aaagaatgtattattcagagtggtgacgcaccagagttggtcactttacacgcggtgctt
caaagaaatcaaattctagtaacgaaatttaaaaaaacggaatttggaacagatgatgta
gttcaagacttaaataggcttttgtattttcttaaggaccaagagagaaatgctagtggc
attcctgaaatggggttaacagaagcaatgagttgtttacaagcgggaatcaaatattta
aacttagcggctgaggaaagcaattataatcaatttaaaataagtatttacactgctgat
cgatttgtacgcctggacagcgctgcgatttcggctctcaatctttttcctaagtcacaa
tcttcttataacaataagacggctgtgcatggtagtcttctaggcgttctggataaatgc
tgtacagcacaaggtcggcgactgctcgccaaatgggttaaacagcctctaagggacata
aacgttattaatgaaagattagaagtagtcgagacacttcttcagaattccgaacttcgc
catatgctacatagtaactgtttaacacgcactccagacttattactatggagcaaaaag
ttaactaactgcaaggcgtcgttacaagattgttatcgagtgtatcagactgttgggaat
gtaccttcgatcgtaaatgtcttgaggaaggctgagaatacttgtattaagtccatactt
attgatcctatctgtgacgttttgctggacatggagcggtatcaaagtatgattgaagaa
acactagacttgaacttggtagatcgtggggaatattttgtagtagcatcatttaatgat
caactgcaagaattaacaaacaaaaaaacgaaaattgaagaaaaaatgcaaaaagtttta
cgctctgccgcaagcgaattaggatttgaagccggaaaatcgataaaattagaatgtaca
gagcagcacggatactttttcagagtcaccttaaaggaagaacaagcattaaggaaaaat
aaaaatttcatcatcattgatgcgatcaagggaggtgttcgattttcaaacaacgccttg
aagcagctaaacagtgattacatggagctgaatacaaattatgaaaaagaacaaaaatca
gttgtcaaagaaattttggaagtagcagccggttatggaaataccgtacgaaatttgaat
ctccacgtagccaaagtagacgttctcgtctcctttgcaactgtcgctgccgattcaccc
atacagtttgttagaccgaaaatgcacaaggaaggctctggtgtactatcgctgacaaaa
gttagacacccttgtttagagctacaggatggattaacatttattccaaacgatgtaaat
tttaaagcgaatgaagctgtattttatataatgactggacctaatatgggcgggaagagc
acgtatattagaagcgttgggattgcagttttattagctcacataggtagcttagtccct
tgtgtagaagccgaaatttctgttgtcgattgcatattggcaagggtaggtgctaatgat
tccgaaataaaaggcctgtcaactttcatgctagaaatggtggagacttctagcattata
aagaccgccacatcgaattcattggttataattgatgaattagggcggggcacatctacc
tacgacggttgcggtatagcatgggctattgcagaatatttggctacgaaaacaatgtgc
ttcacattgtttgcaactcatttccatgaaatcacacagttatctgaaaagtatccaaca
gtacataatatacatgtgacagcagttacaacagaaaaaacaattacaccattgtaccag
gtcagggaaggcgcttgtgatagaagttatggaattcattgcgctcgtttggcagagttc
cccaaagatgttcttgaaaatgcagcagaacatcttgaacagctggaaggtaatgaaatg
aaatttattaaggattttgaacccagtttaaaatgtaaaattgtacaggaaggtaataat
atcgtgaaggaggccttggcaaactgtaaaaacttaaatttggacctatctgatgaagaa
cttttatcacagttatgttcaatcaaaaatgatatagaggagagaaatctttttgttaag
ggactgttgtcggattaa
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