Photinus pyralis (common eastern firefly): 116164907
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Entry
116164907 CDS
T07438
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116164907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116164907
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116164907
mRNA degradation factors
5'-3' decay
Lsm complex
116164907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Parb-CE
Motif
Other DBs
NCBI-GeneID:
116164907
NCBI-ProteinID:
XP_031335014
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MNRPELEGTAHLLDELDKKLIVVLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEFGD
IPRGVFIVRGENVVLLGEIDAQKEANLPLRQVTVDDILDAQRREQESKQDQQRLLTKALK
ERGLNLMPDLTHDDMF
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaataggccagagttggagggcacggcgcatttattggatgaattagacaagaaatta
atcgtagtcttacgcgatggcaggacattaattggataccttcgaagtgttgatcaattt
gccaatttggtattacataaaacgatcgaaagaattcacgtaggcaaggagtttggcgat
ataccaaggggcgtgtttattgtaagaggtgaaaatgtagttcttttaggtgaaatagat
gctcagaaggaagctaacttgcctttacgacaggttactgttgatgacattttagatgca
caaagaagagaacaagaatcgaagcaggatcaacaaagactgttaacaaaagcgttgaaa
gaacgtggcttaaatttgatgcccgatttaactcacgatgatatgttttaa
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integrated database retrieval system
