Photinus pyralis (common eastern firefly): 116165445
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Entry
116165445 CDS
T07438
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116165445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Perilipin
DUF2935
Motif
Other DBs
NCBI-GeneID:
116165445
NCBI-ProteinID:
XP_031335756
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MPSYLSIWARTQTFFFFISCNLFIVTSQQYTGQRSRGYSTRVPLVLRGDQLPPPDGDFFD
NSEEIHPLTHISARWHRREYVPVRLHPCDQSSCYPATGNLLIGREAQLYASSTCGLYSKQ
RYCIVSYLQDQKKCFWCDSRPSRIQQPSSNHSISNIVSRHYVGTPNLSWWQSENGKENVT
IQLDLEAEFHFTHLIIQFKTFRPAAMFIERSYDFGKTWQVYRYFAYDCQRSYPHVWVSSE
NSKNLTDVFCETKYSQVSPSTDGELIYRVLPPTLHIDNPYSQEVQNLLKMTNLRINFNKL
HTLGDDLLDKREDIQEKYYYAISNMIVRGSCSCYGHANRCLPIAGIDQKPDMVHGKCECT
HNTKGSNCEECEDFFNDLPWRPAIGKQTNACRKCNCNNHATSCHFDAAVYEQTGRISGGV
CDGCKHNTMGSNCEHCKPFYYKDPLRDIQDPEICRPCDCDPHGSLDGGICDSTTDSVNGF
EAGKCHCKTNVEGRRCDNCKNGFWNFTSANPHGCQECTCNTLGTIDNQGCNIYNGECTCK
RYVTGRDCNQCLPEYWGLSDKRDGCQPCRCDPGGSYDNNCDVIGGQCKCRDYMTGRRCDT
PQQQYFTASLDFLLYEAELAKPSVTCQVVIREPYRDGGKNTWTGTGFIRAFENSSVEFQV
DDIKTSMDYDINLRYESVMDRDWDSVTVTIIRPNPIDPNGPCASTHPSYDYKQGSLPFSS
RSALFSPPACLEAGENYKIRVDFNNYVYGHGTPSASVLIDSMVLIPHIESISWFNETAPG
QYRHCPIKDFYDHFEDISQECFEYYRSIGALVFKGGLSCQCDPTGSISKLCREFGGNCLC
KPNVLGRRCDRCAPGTYGFGPEGCKVCDCNSIGGLDNFCNVTTGQCKCRPNTYGRECDQC
RTGFWNFPNCQRCDCNGHADICDSRTGACTNCRDNTEGHTCDRCIDGYYGDPRLGVDIPC
RPCPCPGVMMSGHSFADRCSLDPYTKDVICECKEGYGGTRCDECANNFFGNPSLPGGACH
PCDCSGKTDLFDFGNCDPHTGKCLKCLYDTTGDRCEICRPGFYRYDDNDVCQECVCHMLG
TNSSAGPCNAYNGQCLCHVNVIGKQCDQCAENHWKIASGSGCVPCNCDPIGSERLQCNLY
DGQCKCKENFGGLQCNECRENYWGDPKRNECSKCLCNIYGSETLQCHRKTGACVCRPGIG
GYNCDECDRGYLGTAPVCTPCGECFDNWDRILKGHRNATWLIIERAKNIKKIGATGAYTK
EFDEMQQQLHEIDALLNSTKYIDIQSIEEKLIDLGKRINNTESGPIQELYNLIDNITQGI
TLSKIELLRLGGEKDVLQNKIKDLETDGTALQEGDVQGALTLIYTAKQKANLADQKAQKT
RETINYAERQCKATENLVNVTEKEFRDMQASNERSLDDIRNNITELYQIMPELNNLVCDG
RGDPCDVICGGAGCGSCGMAISCENGAKQQAENALSLANTTEFVLKDKEVKANDFIRNVS
QFNTTHAKLLAQEAHDRAYEAFLSTNTSLDLMKKMKNRINEFLNQNHSTPEDIEKVAREV
LEKQIDQKPEEIIELAQKIKDTVESLTNIDPIIAATADDLKKVEKLKSDADSVKIKANEI
LKVAEEVKEALGNSSLAQEQAGIAISGAKGNIDEVNRMLDKIGNTTEDAQQKTNEAADQI
DKLGNRLTQLQVKITSNEEFAKRVIDESQGIQKEANNTHEKFEKLLNQYNSVKIELSNKL
GVVEDSKSRADDLFKRAFQLMLKIKGVESSVDVLKNSPESSLKNLEHEIQALMNEMKQHN
RKIEQRETYYKKCT
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgccatcctatttatcgatatgggccaggacgcagactttttttttctttatttcgtgt
aacttgtttatagtcactagtcaacaatatacaggacagagatctcgcggatactcaaca
agagttcctctagtgttaaggggtgatcaacttccaccacccgatggagatttctttgac
aattcagaagaaatacatcctctaacccatatttcagcacgttggcatcggcgagaatat
gtacctgtcagactgcatccctgtgatcaaagctcgtgttatcccgccaccggaaatcta
ttaattggccgagaagcgcaattgtacgcatcttctacttgtggactttactcaaaacag
cgatactgcatagtttcctatttacaagaccaaaaaaaatgtttctggtgcgactcccga
ccgtcacgaattcaacaaccttcttccaatcatagtattagtaatattgtgtcacgtcac
tatgtcggaaccccaaacttgtcttggtggcagtcggaaaatggcaaagaaaatgtgacg
atacaactagatttagaggccgaatttcattttacccatctaataattcaatttaaaacc
tttcgaccagccgctatgttcattgagcgatcgtatgattttgggaaaacctggcaggtc
tatagatactttgcgtatgattgtcaaagaagttaccctcatgtttgggtttcgtcagaa
aactctaaaaatttaacagatgtgttttgtgagacgaaatattcacaagtatctccttca
accgatggcgaactaatatatagagtacttcccccgacgttacatatagacaacccttac
tctcaagaagtgcaaaatttactgaaaatgactaacttaaggatcaattttaacaaattg
cacacactcggcgatgatttacttgacaagagagaagacatacaggagaagtactactac
gctatcagtaacatgattgtaaggggatcttgttcttgttatggccatgcaaatcggtgt
ttacctatagctgggatcgatcaaaagcctgatatggtgcatggtaaatgcgagtgcaca
cacaacacgaaaggatcaaattgtgaagagtgtgaagattttttcaacgatttgccgtgg
agaccggctataggaaagcaaacaaacgcatgccgaaagtgcaattgtaataatcacgca
acaagttgtcactttgatgctgcagtatatgagcaaacaggacgcattagcggcggtgtg
tgtgatggttgcaagcataataccatgggatctaactgtgagcactgcaaaccgttttat
tataaagatccattacgcgatattcaagatcccgaaatatgcagaccgtgtgattgtgat
ccgcatggttctttggatggtggcatatgcgactctactacagactctgtaaatggcttc
gaggcaggcaaatgtcactgcaaaaccaatgtcgagggtagacgttgcgataattgcaaa
aacggtttttggaacttcacctctgccaatcctcacggatgtcaagagtgcacatgtaac
acattaggaacaatcgacaatcagggatgcaacatatataatggcgaatgcacttgtaag
cgatacgtcacaggaagggattgtaatcaatgtctacctgaatattggggactctccgac
aaaagggacggatgtcaaccttgccgttgtgatccgggcggttcttacgataataattgt
gacgtaattggaggtcaatgtaaatgtcgcgattatatgactggtcgaagatgcgataca
cctcagcaacaatacttcaccgccagtttagattttctgttgtacgaagcagaattggca
aaaccatctgtgacttgccaagttgtaatcagagaaccctatagagatgggggcaaaaac
acgtggactggtacagggttcattcgtgcctttgaaaatagttcggtagaatttcaagta
gatgacataaaaacctcaatggattatgacatcaaccttcgttatgaatctgtcatggat
cgtgactgggacagtgttaccgttacgataatacgtccaaatcctatcgatcctaacggt
ccatgtgcatctacacatccctcttacgattacaaacaaggttcgctaccgttctcaagc
cgaagtgcattgttttcgccacctgcatgcttagaagcgggagaaaattataaaattcgt
gtagattttaataattacgtttatggacatggtacaccatctgcttcagtattaatagat
tcgatggtgttaatccctcatatagaatcaatatcgtggtttaatgaaactgctccaggc
caatatcgccattgtcccataaaagatttttatgaccatttcgaagacatttcacaggaa
tgcttcgagtactaccgaagtattggagcattagtctttaaaggaggtctttcgtgtcaa
tgtgacccaactggttcaataagtaagttatgcagagaatttggtggtaactgtctgtgt
aagccgaacgttttgggtagaagatgcgatcgatgtgcacctggcacatatggttttggt
cctgagggttgtaaagtgtgcgattgtaacagcattggaggattagacaatttctgcaat
gtcaccactggccagtgtaaatgtaggccgaatacttacggtcgtgaatgtgatcagtgt
aggaccggtttttggaactttccaaattgccaacggtgcgattgtaacggtcacgcggat
atttgcgactcacgcaccggtgcatgtacgaattgtagagataacacagaagggcacact
tgcgatcggtgcatcgacggatattatggagatccaagattaggtgtagacattccttgc
cgtccctgtccttgtccgggtgtaatgatgtccgggcactcgttcgcagatcgctgttct
ttggatccctacactaaagacgttatttgcgaatgcaaagaaggttatggaggtacaagg
tgtgacgaatgcgccaataacttctttggtaatccgtctcttcccggcggtgcgtgtcat
ccatgcgattgtagcggtaaaacggaccttttcgattttggaaattgcgatccgcatact
ggcaaatgcttaaaatgcctttacgatacaactggcgatagatgtgaaatttgtaggccc
ggattttatcgatacgacgacaatgacgtatgccaagaatgcgtttgtcatatgttggga
acgaatagttccgccggaccatgtaatgcttacaatggtcagtgtttgtgtcatgtcaac
gttatcggtaaacaatgtgatcaatgcgctgaaaatcattggaaaattgctagtgggtcc
gggtgcgtgccctgtaattgtgacccaattggatctgaaagactacaatgtaacttgtat
gacggccaatgtaagtgtaaagaaaattttggaggtcttcaatgtaacgagtgtagggag
aattattggggtgatccgaagcgaaatgaatgctctaaatgcctatgtaatatttatggc
tctgagaccttacaatgccatagaaaaactggtgcctgtgtttgccgaccgggtataggt
ggttataattgcgacgaatgcgatcgaggataccttggaactgctccagtgtgcacaccg
tgtggagaatgctttgacaattgggataggattttaaagggccacagaaacgcaacctgg
cttattattgaacgggcgaagaacattaagaaaattggtgctactggtgcatacactaag
gagtttgacgaaatgcagcaacaattgcatgaaattgatgccttactaaacagtacaaag
tatattgacatacaatccattgaagaaaagctgattgatttgggaaaacgaattaacaat
acagaatctgggccaattcaagaattgtataacttaattgacaatatcacccaaggtata
acgctgtccaagatcgaattactgcgcttgggaggggaaaaagatgttcttcagaataaa
attaaagatttagaaacagacggaacagcacttcaagaaggtgacgttcaaggggcactt
actttaatttatacagcaaaacaaaaggcaaatcttgctgatcaaaaagctcaaaaaact
cgggagactattaactatgcagaaagacagtgcaaggcaacggaaaatttggttaatgtt
acagaaaaggaattccgagatatgcaagcgagcaatgaacgttcgctagatgacatacga
aataatatcaccgagctgtatcaaattatgccagagctaaacaatttagtttgtgatgga
cgaggtgatccgtgcgatgtgatttgtggcggtgctggttgtggtagttgcggaatggcg
atttcttgcgaaaacggtgcgaaacagcaggccgagaatgcactaagtttagccaatact
acagagttcgttctgaaagataaggaagtgaaggctaatgattttataagaaatgtatca
caattcaatacgactcacgcaaagttactggctcaagaagcgcatgaccgagcatatgaa
gcattcttatccacaaacacttcgctggacttgatgaagaagatgaagaatcgcataaac
gaatttttgaatcagaaccattctactcccgaagatattgaaaaggttgccagagaagtg
ttagaaaagcaaattgatcaaaagcctgaggaaattatagaattggctcaaaaaatcaag
gacactgtcgaatcattgacaaacattgatcccattattgcagccaccgccgacgatcta
aagaaagttgaaaaactgaaaagtgacgcagattctgttaaaattaaagccaacgaaatt
ttgaaagtcgccgaagaggtaaaggaggcattaggtaatagtagtttagctcaagagcaa
gccggtatagcaatttctggtgcgaaagggaatattgatgaagtcaatagaatgctagat
aagatcggtaatacaacagaagatgctcagcagaaaacgaacgaagctgcggatcaaatc
gacaagttaggcaatcggctaactcagttgcaggtgaaaatcacgagcaatgaagagttt
gcaaagcgtgtaatcgacgaatcgcaaggcatccagaaggaggcgaataatacgcacgag
aagtttgagaaattattaaaccaatataatagcgttaaaatcgaattgtcaaataaattg
ggagtagtggaggattctaaaagcagagcggatgacctatttaaaagagcgtttcaattg
atgttaaaaatcaaaggcgtcgagtcctctgtggatgttcttaaaaattctccagaaagt
tccttgaaaaatttggagcacgaaattcaggcgttaatgaatgaaatgaagcagcataat
agaaaaatagaacaaagggaaacttattataaaaaatgtacttaa
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integrated database retrieval system
