Photinus pyralis (common eastern firefly): 116167839
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Entry
116167839 CDS
T07438
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr04140
Autophagy - animal
ppyr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116167839
04148 Efferocytosis
116167839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyr04131
]
116167839
Membrane trafficking [BR:
ppyr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
116167839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
TPR_Vps41
Clathrin
Lgl_C
Beta-prop_RIG_2nd
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
116167839
NCBI-ProteinID:
XP_031339249
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MHEAYQVSQLLKLTVQIESITAYDENLLVGTRQGHLFMYRVVSTSDDKYDVELMRYNKTF
SKKPIQQLDVIPEQHLLVSLIDNVIQVHDINGSQFPIVHQATGTKGANIFTIDSQIKTSM
TGEKSLFARLCVAVKRKLQLYYWKNNEFLKLIDDISLNDVPRALGWCQETLCVGFRGEYS
LFELSGEKQDLFPTSSSKSIDPCIMKVSDTIFALGRETQTVLVNVKGDAEKTKALRWSDI
PIAMSWDEPYTIGVLPESIEVQTFEPGGLVQILDNLPKARLVSHCKQGLVYIASVSQVWC
LHGVDISKQREMLLKDKQFQLALTLTKVSNETEEDKCEKIHQIQTLLAYDLFANKEFTKS
MKEFLKLDTDPYDVIRLFPDLLPQQTGVPETQDVSEKLTERELEDGLLALIEYLTEVRHK
LQNEPKVPNVNASGNLNEKANCSKSTQQLLQIIDTTLLKCYLQTNDALVAPLLRLNHCHL
AETERTLKKHGKLNELIILYQTKGQHRRALELLQREKTVDKTVTYLQQLGADNMGLILEF
SDWVLKESPEDGLKIFTEDLVEVETLPRPRVLDCLLRSHPSLVIPYLEHVVLTWCDKNPL
FHNALVHQYREQAMADDPIALRVQKKLLDFLETSQYYTPDTVLIHFPLDKLLEERAVILG
RLGKHEQALFIYVRVLGDVTRAVSYCGKVFESSAKNVGEEVYVSLIKLILDPNSAPNSFP
QTCLSPVTAQPNLEQALQLLEEFGSRVNPLSVLAVIPDSVHISRIYKFLQMALHKAVEDR
RHVQLLKGLLYAEYLQCLEARLHLQSQSVHITDLNVCPVCKKRFGNQSAFVRYPNGEVVH
YSCQDRKL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagcgtatcaagtctcccaattactcaaattaactgtccaaattgagtctata
acggcctacgatgaaaatttgcttgttggaacacgacaagggcacctgtttatgtataga
gttgtctctacctctgatgacaaatacgacgtagaattaatgaggtataataaaaccttc
agcaaaaagccaatacagcagctcgatgttattcctgaacaacatttgctagtcagttta
attgataacgttatacaggttcacgacatcaatggaagtcaatttccaattgtgcaccaa
gcgactggcaccaagggtgctaatatttttacaattgattcacagatcaagacgtctatg
actggcgagaaaagcttgttcgcacgattgtgtgttgcagtgaaaaggaagttgcaactt
tactactggaaaaataacgaatttttgaaattaattgatgacatttctttaaatgatgtt
ccccgtgcgcttggatggtgtcaagagactttgtgtgtggggtttcgtggggagtactct
ctttttgagttatcgggagaaaaacaagatctctttccaacaagcagcagtaaatccatc
gatccgtgcataatgaaagtatctgatactatttttgcattgggccgagaaacacagacg
gttcttgttaatgttaaaggtgatgccgaaaagacgaaagcgttacgttggtctgacata
ccgatcgcgatgtcgtgggatgaaccgtacacgatcggagtacttcctgaatccattgag
gtccaaacttttgaaccgggtggattggtgcaaatcttggataatttaccgaaagctcga
ctggtgtcgcattgcaaacaggggttggtttatattgcttcagttagtcaagtgtggtgt
cttcatggcgttgatatatcgaaacaacgtgaaatgcttctgaaggataaacagtttcag
ttagcactcacactaacgaaagtttctaatgaaacggaagaggataaatgcgaaaaaatt
caccaaattcaaacactgttagcttacgacttgttcgcgaataaagagtttacgaagagc
atgaaggaatttctaaagctcgacacggatccgtatgatgtaattcgtttgttccccgat
ttgctgccccaacaaactggcgttccggaaacgcaggatgtgtccgaaaaacttaccgag
cgcgaattggaagacggtcttttagctctaattgaatacttgacggaagtgcgtcataaa
ttgcagaacgaacccaaagtaccgaacgttaacgccagcggtaatttaaacgagaaagcg
aactgtagtaaatcgactcagcagctattgcaaataatagacaccaccctactgaagtgt
tacctccaaacgaatgacgccttggtggcgcccttactgagattaaatcattgccatctt
gctgagactgagcgcactttaaagaagcatggaaaattgaacgaattaatcatcctttac
caaacgaaagggcaacatcgacgtgcgctcgagctgctgcaacgggaaaaaactgtcgac
aaaaccgttacatacctacagcaactcggcgccgacaatatgggcctaatattggagttt
tcagattgggtactcaaagaatctccggaggatgggctcaaaatctttacagaggacttg
gtggaggtggagactttgcctcggccgcgtgttttggattgcctattaagatcgcatccg
tcgttagtcattccgtatttggaacacgtagttttaacgtggtgcgataagaatccctta
tttcacaatgccctcgtgcatcagtatcgcgagcaagctatggctgatgatcccatagca
ctccgtgtacaaaagaaattgctggattttctcgaaacctcccagtattatacgcctgat
actgttttaatacattttcctttggataagttgctggaagaaagagctgtgattttaggg
aggctcggtaagcacgagcaagcgttgtttatttatgtgcgtgttttgggagatgttaca
cgtgccgtttcttactgtggcaaagtgtttgaatcgtccgcaaagaatgtgggagaggag
gtgtatgtttctttaataaaattgatactcgatcctaattcggcacccaactcattcccc
cagacctgcctttcaccggttacggctcaacctaacttagaacaagcattacagttgctc
gaggagtttggttccagagtcaatccgttatcagtgttagctgtaattcctgattctgtg
catatttccaggatatacaagttcctacaaatggcacttcataaggcagtcgaggatcgt
agacatgtgcaattactgaagggattactctacgccgaatatttacaatgtcttgaggcc
aggttacatttgcaaagtcaaagtgtacacatcaccgacttgaatgtatgcccagtttgt
aaaaagagatttggtaatcaaagtgcatttgttcgttatcctaatggtgaagttgttcat
tattcttgtcaagaccgaaaattgtga
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