Photinus pyralis (common eastern firefly): 116168276
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Entry
116168276 CDS
T07438
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116168276
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116168276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116168276
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116168276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
DUF7129
CfaE_2nd
Motif
Other DBs
NCBI-GeneID:
116168276
NCBI-ProteinID:
XP_031339868
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MDGQNNNLDNNTSLQEETNSNKSFVKKVKSHVSELLSTSFGKWFSGDTNIRHRVYDEDDD
NYEIQPPSKRVKIPTPESKPYTNSLSSEFNNFSPISSRIETQTRGNIFDSVAGPSGLQQK
DRSATIRLFNGDKESESGESDASSVSRLRNTTETRINFHTPPSTHSRSLFTDRPYNSQLN
TSLSSKRPSFNASTFGSPNFVDRTLSTKQILSSPFYSGRTVYGGASAYSARQKSAPDRPK
SQIQVKPVNNSVGNDVSLSKTARRILNALEEFNPVTDAKKIPYPKQRVRPEGILSKYAGA
NPYVTRERKIPFALNKELHVPTVPDLLKMKLKERLQDSTVAVRQIATTSKSVLNRDDYKI
RSKEDDVPKHSNKMKNKLTATRQKNDNQQIEEVKLPAVTLPITTLPKFDFSLPPPPSSAK
QPLVTVACNEPPKSTTPTSSSVIKKKADAVDVKDQVAQFEFSNPLILADNLKSIIAINDF
KFSDPVFKQRDKSAQDVGVNFKVSTSENFTLKRKNQGVPPVIPKLSKGSVEDVFNTPVAE
SLDKFKPAAALWECNVCLIRNTPDKLKCAACEAAKPGTEAVKSDGAAKTAPSFGDQFKPP
SSTWECPTCLIRNKDEVEKCVACETVKPGSKSAAPSGFGFGDAFKKKGNEWECSVCMIRN
NEDKTVCQACETPKPGTKVDEKPAKTVNVATFNFGIFPTTASLTKTTGTETVQTPSFSLP
STSVVTSTSTIPTFTFGIPATSVIPPTPVVPATPVTESKKVIEPLLPIAKVSEPSTMASK
PVNDASKAPVSSGIFVFSVPPKVSATVSDLIQSEATKPTVLSTSPSAFTFGKSSTAITPS
LKRSAADSDSAAVENKKPSSAITFQPPAINSPITPKPAVSQPTTTSSSFMFTPTPTQSHP
TTTASTNLFTFGPTKTTASSLFGNTVTTTQSPVFNFSHSEKPAPTQPTFGGTTEKQPALP
MFGSPSSNSLFGSAKSAFDVPPSTQPFGSVASTVFGSEPKPLMTSFADSPKSQSLFGMEP
KPSLFGATEPKAPSTFGTEPSAPLFGADPKSTPFGSGTEQKAPIFGTGSDQKPPSIFGTD
QKPATFGAADNKPFTFGPPSNDTAAKSQFAFGAKPPEPNKSFFGAATPASTPAAGGFNFN
STVTPTTFNFSAPKIENALPFQSAPSAGNIFNAAPVQPQQQQAQPLQNGGFNFGTPANAS
TGNKTGFNFGATNQFTPAAAPAPNAAPSATTGFWGMTNNTNANPAATASGFNFGQTAPAQ
APPSFNANIKPNFNFTAGNMVTGFSATPENSPVTQRRRLKAVRRNPR
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcaaaataataacttggacaacaatacgtctctacaggaagaaactaactcg
aataagtccttcgtgaagaaagtcaaatcccatgtgtcggaattactgtcgacttcattt
gggaaatggttcagcggcgatactaatatacggcatagagtgtacgatgaggacgacgac
aactacgaaattcaacctccctcgaagagagtcaaaatacccactccggagtcgaaacct
tacacaaattcgttaagtagcgagtttaacaattttagtccaatttcgagtcgcattgaa
acacaaactcgtggaaatatctttgacagtgtcgccggaccgtcgggattacagcagaaa
gatagatctgcaacgattaggttatttaatggggataaagagtccgagagtggcgagtca
gatgcgtcttcggtatcgagattaagaaatacaacagaaactaggattaattttcacaca
ccgccaagtacacacagtcgctcactgttcaccgatcggccctacaattcgcagttaaac
acgtctctaagctcaaaacgcccttcgtttaacgcctctactttcggttcgccgaacttc
gtcgataggacgttgtcgaccaaacaaattttaagctcgccgttttacagtggacgcacg
gtttatgggggcgcgtcggcgtacagcgctcgtcaaaagagcgcgcccgaccggccgaaa
agtcaaatacaagtgaaacccgtaaataattcggtcggtaacgacgtgagcctaagcaaa
acggctagaaggatattgaacgcgttggaggagtttaatcccgttacggatgcgaagaaa
ataccgtatcccaagcagagagtgcggcccgaaggtattttatcgaagtacgcaggtgca
aatccttatgtgactcgggagcgtaagattcccttcgctttgaacaaggagctgcatgta
ccgactgtgccagatttgctcaaaatgaaattgaaggaacgactccaggacagtacggtg
gctgtacggcaaatcgcgacgacttcaaaatctgtacttaatagagatgattacaaaata
cgtagcaaagaagatgacgtgccgaaacatagtaacaagatgaagaacaagctcacagca
acacgccagaagaatgataatcaacaaattgaggaggttaagctaccggcggtcacttta
ccgataactactctgccgaagtttgacttttcacttccgccacctccatctagtgcaaag
caacctcttgtgacggttgcatgtaatgaacccccgaaaagtactactccgacaagctca
tccgttattaaaaagaaagctgatgcagttgatgtaaaagaccaagttgcccaatttgag
ttttccaatcctctgatactcgccgacaatttaaagtcgataatcgcgattaacgatttt
aaattcagtgatcccgtatttaaacaaagagacaaaagtgctcaggacgttggtgtaaat
ttcaaagtgtctacgtctgagaatttcactttgaaaagaaaaaatcaaggtgttccccct
gttatccccaagttatctaaaggaagtgtcgaggacgtgtttaatacacccgtagcggaa
tcgttggacaaatttaaaccggcagctgctttgtgggagtgtaacgtgtgtttaatccga
aatacgcccgacaagctgaagtgcgccgcgtgcgaggccgcgaaaccagggaccgaggca
gttaagagtgatggtgctgcgaaaaccgcgccatcttttggagaccaatttaaaccaccc
agctcgacgtgggagtgtcccacttgtttaatcagaaataaggacgaggttgaaaagtgt
gtcgcttgtgagactgtcaaaccgggatcgaaaagcgcagctccctcgggctttgggttt
ggggatgcctttaaaaagaagggaaacgagtgggagtgttcggtgtgtatgatacggaac
aatgaggacaagacggtttgtcaagcttgcgaaactccaaaacctggcacgaaagtcgat
gagaaaccggcaaagactgttaacgttgccactttcaattttggaatttttcctacgact
gcatcccttacaaagacaacgggaactgaaaccgtacagactcccagcttttcgttacca
agtacaagtgtagttacatcaacttcgaccattcccacatttacatttggaattccagca
acgtccgtaattccaccaacgcctgtagttccagcaacgcccgtgactgagagcaagaaa
gtcattgaaccattgttgcccatagctaaagtgagtgaacccagcactatggcatcaaaa
cctgtcaacgacgcttcaaaggctccagtttcaagcggtatattcgtatttagcgttcct
ccaaaagtaagcgcaacagtatcagatctgattcaatcagaagctaccaaaccaacagtg
ttatccacgtcaccttcggcatttacatttggtaaaagttccaccgcaatcactccatca
ttaaaacgcagtgccgctgattccgattcagccgcagttgaaaacaaaaaaccatcatcc
gcaatcaccttccaacctcccgcaattaattcccccattaccccgaaacctgcagtttct
cagcccacaacaacctcatccagcttcatgtttacaccaacacccacacaatctcatccc
accactacggcatcaacaaacttgttcacctttggcccgacgaaaacgacggcttcttcg
ctatttggaaatacggtcaccaccacacagtctccagttttcaatttttcgcattcggaa
aagccggcgccgactcagcccactttcggcgggaccacagaaaaacaaccggccttgcca
atgttcgggtcaccatcgtcgaattctctgtttggctccgcaaaatcggccttcgacgta
ccgccatcgacgcaaccattcgggtcagtggcgtcgacggtcttcggatctgagccgaaa
cctttgatgacatcattcgctgattcgccaaaatcgcaatctctattcggaatggagccc
aaaccgtctctttttggggcgaccgagccgaaagcgccatctacatttggaaccgaacca
tccgcaccccttttcggcgccgacccgaaatcgacaccgtttggatcaggaaccgaacag
aaggcgcccatttttggaaccggcagcgatcagaagccgccgtcgatattcggaaccgat
cagaaacccgcaaccttcggagccgccgataataaacccttcacgttcggtccgccttcc
aacgacactgcggcgaagtcacaatttgcgttcggcgccaagccgcccgagccgaacaag
tcgtttttcggcgccgcgacgccagcttcgacgccggccgccggcggttttaactttaac
tcgaccgtcacgccgacgaccttcaactttagcgctcccaaaattgagaacgcgctacca
ttccaaagcgcaccgagcgccggcaatatcttcaacgccgcgcccgtgcagccgcagcag
cagcaggcgcaaccgctacagaacggcggctttaatttcggaacgcccgctaacgccagc
acgggcaataaaaccggcttcaattttggcgccactaatcagttcacacccgccgccgca
cctgcaccgaacgctgcgcctagcgccaccacgggattttggggaatgacaaacaacaca
aatgcaaatcctgcggcgacggcaagcggcttcaatttcggtcagacagcaccggcacaa
gcgcccccgtcatttaacgcgaacatcaaaccaaacttcaacttcaccgctggaaatatg
gtgactggattttccgcgacgcccgaaaattcgccggtaacgcagcgaaggagactaaaa
gcagtaagacgaaatcctcgatag
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