Photinus pyralis (common eastern firefly): 116168560
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Entry
116168560 CDS
T07438
Name
(RefSeq) high mobility group protein DSP1-like isoform X1
KO
K10802
high mobility group protein B1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03410
Base excision repair
ppyr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116168560
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116168560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyr03036
]
116168560
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116168560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppyr04147
]
116168560
Chromosome and associated proteins [BR:
ppyr03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
116168560
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116168560
MMR (mismatch excision repair)
Other MMR factors
116168560
Exosome [BR:
ppyr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116168560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
DUF3974
Motif
Other DBs
NCBI-GeneID:
116168560
NCBI-ProteinID:
XP_031340323
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MSDHRGGVWGAREDAVWWPGAIAAADQQSLHHQQLLHQQQQQLAVQQQQQQQAAQQQQQQ
QQNEIANSNAGTHQLFSYKMASTFQHPATTMANVSSPSPIAAPGMRGYEYRLAGNPTMTA
PPPTSQWWYPSAMDNSMQNSLPPNSMQNMSPVQTPPPVTVQSAVQQQHQAAEVHRQQEVQ
RHQAEAQAARQQQAVAEAQARHQSQQQQNHLQQQNHQSQQNHQHTQTLHQPLQNHQSLHL
QSANHQVPDQKSLHQISHIQVPTRGRMPRGKADSRPRGRMTAYAFFVQTCREEHKKKHPE
ENVVFAEFSKKCAERWKTMLDKEKKRFHEMAEKDKKRYDAEMQNYTPPKGEKQRGKKRKQ
IKDPNAPKRSLSAFFWFCNDERSKVKSQNPEYGVGDIAKELGRRWAEADSDVKSKYEAMA
EKDKARYEKEMTAYKKKNNPAMPAAPVPEADDEDDEEEELEDDEDE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccatcgtggtggagtatggggtgcgcgggaggatgccgtttggtggcccggc
gcaatagccgccgccgatcaacaatctctccatcaccaacagttacttcaccaacaacaa
caacaacttgcggtccagcagcagcagcaacaacaggccgcccaacagcagcagcagcaa
caacaaaatgaaattgccaattcaaacgccgggacacaccaactcttcagttacaagatg
gccagcacgtttcaacatcccgcaaccaccatggcaaatgtatcttccccttcgcctatc
gcagcaccgggtatgcgcggttacgaatacagacttgctggaaacccaactatgaccgct
cccccgccgacgtcacaatggtggtaccctagtgcgatggacaactcgatgcaaaattca
ttaccaccaaacagcatgcaaaatatgtcacctgtacagactcctcccccagtgacagtt
cagtcagcagttcagcaacagcatcaagcggctgaagttcataggcaacaggaagtgcaa
aggcatcaagcagaggctcaagctgccagacagcagcaagcggttgcggaagctcaggcg
aggcaccagtctcaacagcagcaaaatcatttgcaacagcaaaaccaccaatcgcagcaa
aaccatcagcacactcagacgcttcatcagcccctacagaatcaccagtcgttacacttg
caatctgcgaatcatcaagttccagaccaaaagtcgcttcatcaaattagtcatatccag
gtacctacgagaggaaggatgccgcgtggtaaagccgattcgagacctaggggtcgtatg
accgcctacgcgttttttgtacagacgtgcagagaagagcacaagaaaaagcatcccgaa
gaaaacgtcgtattcgccgaattctcgaagaaatgtgcggaaaggtggaagactatgctg
gataaagaaaagaaaagattccacgagatggccgaaaaggacaagaagcgttacgatgcc
gaaatgcaaaactacactccaccgaaaggcgaaaaacaacgcggtaaaaagaggaagcaa
atcaaagatccaaacgcaccaaaacgttccttgtccgctttcttttggttttgcaatgac
gaacgcagcaaagtcaagtcacaaaatccggagtatggcgtaggcgacattgctaaagaa
ttgggacgaagatgggcagaagcggattctgacgtaaaatcaaaatacgaagcgatggcc
gaaaaagataaggctcgctatgaaaaagaaatgacagcgtacaagaagaaaaataatccc
gccatgcctgctgctcctgtacctgaagcggatgatgaagacgacgaggaggaagaacta
gaggacgatgaagatgaataa
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integrated database retrieval system
