Photinus pyralis (common eastern firefly): 116169240
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Entry
116169240 CDS
T07438
Name
(RefSeq) TBP-related factor isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116169240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyr03000
]
116169240
03021 Transcription machinery [BR:
ppyr03021
]
116169240
Transcription factors [BR:
ppyr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
116169240
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116169240
RNA polymerase III system
TFIIIB
116169240
RNA polymerase I system
SL1/TIF-1B
116169240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
TACO1_YebC_N
Motif
Other DBs
NCBI-GeneID:
116169240
NCBI-ProteinID:
XP_031341133
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
MEPKANDAHLRQILNSPARFTPAVPIPDWSNNAATTSTTTAATNAMSSKSASNMTVLTPG
GVGDPHTNVTLQNCVATIDLGCELNLMKINSRTRNSEYNPLRFNGVVMRIRDPRSTALIF
RSGKIVCTGARNEHDALLASKKFARIIQKLGFNIKFINFRVQNIVATCDLRFPIKLENLH
HVHGQFSRYEPELFPGLIYRMIKPRIVLLIFVNGKIVFTGGKSRQDIKDALDNMYPILRS
FRKN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaagcaaacgacgcccatttacgacaaatactaaacagtccagcacgtttc
acaccggctgttcccattccggactggtcgaacaatgctgcaacaacctcgaccaccaca
gcagctacaaatgcgatgtcctcaaagtccgcatcgaatatgacagtattaacaccaggc
ggtgttggtgatccacatactaacgtaacattgcaaaactgtgtcgcgacaatcgatttg
ggttgcgagttaaacttaatgaaaataaactcccgcacacgaaattcggaatacaatccc
ctacggtttaacggcgtagttatgcgcataagagacccacgtagtaccgctttaatattt
cgatctgggaaaatagtctgcacgggagcgcgcaatgagcatgacgccttgttggcttcg
aaaaagtttgctagaataatccaaaagttgggttttaatatcaaattcatcaattttaga
gtacaaaacattgtcgcgacgtgcgacttgaggtttcctataaaactagaaaatttgcac
cacgtacatggccagtttagtaggtatgaaccagagttattccctggtttgatttatcgc
atgattaaaccacgtattgtattactcatatttgtaaatgggaaaattgttttcaccgga
gggaagtccaggcaagatataaaagatgctttagacaatatgtatcctattttaagaagc
tttaggaagaactga
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integrated database retrieval system