Photinus pyralis (common eastern firefly): 116169472
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Entry
116169472 CDS
T07438
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03022
Basal transcription factors
ppyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116169472
09124 Replication and repair
03420 Nucleotide excision repair
116169472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116169472
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116169472
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116169472
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116169472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Eno-Rase_FAD_bd
Motif
Other DBs
NCBI-GeneID:
116169472
NCBI-ProteinID:
XP_031341436
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MTTSSEEILLQVPHVRYKKGDGTLYLMDQRIAWMMENRDTVSISHLYSDIKTQKISPEGK
AKVQLQVVLHSGVSSTFHFINRGGIQEQSADRDRVKELLQTLLPKFKRKVDKELEEKNRL
LSTNPTLLQLYKDLVMTEVVTSEEFWTHHAVQYTQAQKTQQQAIGVSGAFLADIKPQTDG
CNGLKYNITADIIECIFKTYPAVQKKYIEHVPAKLSEAQFWTKFFQSHYFHRDRKYVESK
DLFTECGKMDDQEMKKDIQTGVKDPLVDITTFVDKSLDECYGMEVEKTPGSSGTVSQAMI
KRFNQHSIMVLKASKNKHPEPESSDSSPSNVKGVEVSSNSISNGISSADDAHVNKKIRIQ
EKITYEDLDSSNDTSNASKSILNLSKVERYLHGPMPGSNAEYLSVNDASSINRNILNECK
QWQGGRQQTSNLVSPAAAVGALGELSPGGALMRGFQEQSLAQLVPSDIEKEVRNLYLSLS
ELLNHFWKCFPPTTSTLEQKAVKMHEALHRFHGTKVKPFEDKLIRELSPLSYHLTKHLNQ
LLNVAYQKFNNWQKMKTLHR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactacctccagtgaagaaattttattgcaagtacctcatgttcgttataaaaaaggg
gatggtacattatatttaatggaccagcggattgcatggatgatggaaaacagagatacg
gtttcaatttcccatttatactcggacataaaaacacaaaagatttctccagaaggcaag
gcgaaggtacaattgcaggttgttttgcatagtggggtgtcttctacctttcattttatc
aatagaggtggtatccaggaacaatccgcagatcgggatcgagtaaaggaactattacaa
acgcttttgccaaagttcaaacgaaaagtcgataaagaattggaggagaaaaatcgattg
ctgtctaccaatcctaccttattgcagctttacaaagacttagttatgacagaggtggta
acgtctgaagagttttggactcaccatgctgtgcaatatacgcaagcacaaaaaacgcag
cagcaagctataggtgtgtctggagcatttttagcagatataaagccacaaacggatggt
tgtaatggtctcaagtataacataactgcagatattatcgagtgtatatttaaaacatat
cctgcggtgcagaagaaatatattgaacatgtacctgccaaattgtcggaggcgcaattt
tggacgaaattctttcagtcacattattttcatagggaccgaaagtatgtcgagagtaaa
gatctctttaccgaatgcggaaaaatggacgatcaagaaatgaagaaagacattcaaacc
ggtgtaaaagatccgttagtcgatataacgacatttgtagataaatcgttggacgaatgt
tacggtatggaagttgaaaagacgcctggtagcagtgggactgttagccaggcaatgatc
aaacgttttaatcaacattcgattatggtgctcaaagcctctaaaaataaacacccagaa
ccggagagctctgattcttctccgagcaatgtaaaaggtgtggaagtatccagcaacagt
attagtaacgggataagtagcgcggatgacgcacatgttaataaaaaaattaggatacaa
gaaaaaattacatacgaagatttagattcaagtaatgacacgagtaatgcttcgaagtcc
attttaaatttatcaaaggtagaacgatatttgcatggaccaatgccaggatcgaacgcc
gaatatttaagtgtaaatgacgcctcgtcgataaatcgaaatatattaaacgaatgcaag
caatggcaaggtggacggcaacagacatccaatttagttagtccggccgcagctgtaggc
gcgttgggtgaactttcacctggaggtgcactcatgagaggttttcaggaacagtcctta
gcccagttggtaccgtctgatatagaaaaagaagttagaaatttatatctgtccttatca
gaactattgaatcatttttggaagtgttttccacctacaacaagtacgttagaacagaaa
gctgttaaaatgcacgaagcgctacataggtttcatggtactaaagttaaaccgtttgag
gacaagttaattcgtgaactctctccattgtcgtatcacctaacgaagcacttaaatcag
ctacttaatgttgcgtatcaaaaatttaataattggcagaaaatgaaaacattacatagg
tag
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integrated database retrieval system
