Photinus pyralis (common eastern firefly): 116170476
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Entry
116170476 CDS
T07438
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr04512
ECM-receptor interaction
ppyr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116170476
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116170476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppyr04147
]
116170476
00536 Glycosaminoglycan binding proteins [BR:
ppyr00536
]
116170476
Exosome [BR:
ppyr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116170476
Glycosaminoglycan binding proteins [BR:
ppyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116170476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116170476
NCBI-ProteinID:
XP_031342766
LinkDB
All DBs
Position
Unknown
AA seq
2220 aa
AA seq
DB search
MTNNGLRLLASFLGLLVCVSAQFFTLSSANRTGLYGKDDSYSGRQNYISSDTDRTRLDPS
ISSDGSHSYGADVHYPRNPSEGQPPSATHEQDPRRNEEDDSAEEDDDFDDQNRDDRQEYY
NHNAPGGQSSRRSWYETSSGHRQPVDYPPSDNENRVDSETDNRYPYHESSATASRGQGDP
NSYNYGSHSQAPVNVSSETRSYYYESSSGQQGQPPSISGQAPDEGTYRQGVSRYETGGGS
NPYYDPSRPGSPQSQPPYAHTSSSSSNSYYETSGGQPAPESPQSPGLDPSRTYYYGSSSG
QGAPGAPQPHPPSGHSSSSSSSYYYESSSGQASPGGAQPASPYGPGGAYPGAPQPSHGQT
SDSRSYHYESSGGQAAPGSPQQPTSGQTSSSSSYHYESSSGQASPGAQQPPSPGQGSPDS
SYSNSYYYESSSGQGSSPGQAPSGAPGQYSHQGRGDVRTGYESSSSQVSRTEQDIRGAYP
SAPYAGRRPYDSSYDVVEAPNSAFGPKRGNERCIPKCFAEKGSRGFPGLPGIPGEKGQRG
FPGPEGAMGSKGEKGEYGPIGPRGPKGDRGKIGVPGFPGINGVPGLQGPPGAPGIPGMDG
FNGTDGSSGVPGQSGEQGPRGYPGSPGMKGMKGEAAHCEINLKGQKGEPGLNGVTGPAGL
PGPVGPLGNPGIAGEVGLPGPRGPPGLKGQKGNMGLGYEGQKGEKGSKGQTGMKGEAAVL
PFGTDTHIVGPMGDKGDKGDHGDYGPLGQKGEPGPEGDYGIPGGVGMKGEKGLPGAPGPR
GRDGFPGIPGPLGQKGDRGVEGLPGLPGRPGTKGEPGRDGPVGPQGLRGPQGPPGGGKGK
PGPPGPAGPRGYPGPMGPKGMDGFDGDQGPRGPIGQPGGPGVPGRPGPEGAPGEKGHKGD
SGAVGLPGGEGPRGFPGSQGQQGPRGFPGEKGLSIIGQKGSDGLPGRDGLKGLKGEKGYP
GPRGIPGDSLEGIPGSPGLPGRPGEKGAAGRPGNPGIPGLHGEKGDIGGRCQDCLPGAKG
EKGDRGFDGLPGTPGARGLPGERGYPGVPGADGLSGAPGAQGPRGKDGIPGKPGYDGDKG
EPAFIPGDLVRAPKGDKGERGLPGIAGPPGPIGPVGPVGPSGLPGFPGLKGDTGYQGFPG
PDGRPGDTGIPGAKGEKGASIKGEPGFPGQKGAAGFKGDPGATGPKGAPGSCPQSFTEGF
KGNKGEKGEKGELGPPGYNGLTGDKGLRGLTGEPGSPGQTGAPGPVGQRGLPGPRGDKGE
MGPLGFPGEPGKDGDRGIPGIPGTKGGKGEPGISAIGPPGPPGMLGPQGEKGLPGFPGKT
GLPGPSGMPGLQGEKGDVGIPGLSGTPGYPGQKGDTGPFGPPGAPGAPGRPGYDGPKGEI
GFKGEIGRPGLQGFPGEKGEPGVPGADGPKGFPGPRGAPGKSGLSGVDGRPGERGEKGDH
GYPGPPGPPGLLGAPGLPGLIGEKGDVGPVGGPGLPGQNGYPGAKGESGLPGLPGLKGEN
GAASEKGQKGEPGIPGLRGSPGQSGRDGLHGAKGEAGIPGIGIPGTPGAKGERGIPGIDG
LPGLRGQKGLPGLAGQLGQKGDHGLTGAPGAPGVEGIDGLPGEKGDIGFPGIPGFQGAKG
DVGYPGQHGFDGAKGERGAPGPAGPIGFPGLEGKMGDRGLPGPLVSVKGEKGEPGASGLP
GRQGEKGAMGFNGATGIAGEKGSAGYPGPKGDIGLPGAAGHKGDRGFPGQPGLPGITVKG
EKGLPGLPGKNGRDGLPGIVGEKGDRGFPGLPGAVGVRGPPGPIGPQGEKGDQGVSGLPG
APGNDGSPGRPGFDGAFGLAGEKGDRGLPGLMGAPGQKGERGLTGIQGPPGFNGEKGDRG
LNGYPGATGPQGPPGEKGFPGPSGLVGIQGFIGQKGEKGEMAVVIPGPKGDRGFPGTPGR
PGERGAPGLDGLPGQIGPKGEPGPSGRNGSPGPVGAIGPKGDRGFDGLAGAVGAIGFTGA
KGEPGASCDVTPDYLTGILLVRHSQTVDVPTCEPGHIKLWDGYSLLYIEGNEKAHHQDLG
FAGSCIRKFSTMPFLFCDFNNVCNYASRNDRSYWLSTSAPMPMMPVEESAIRQYISRCVV
CEAPANVIAVHSQSLTLPECPSGWSGLWIGYSFVMHTAAGAEGGGQSLSSPGSCLEDFRA
TPFIECNGARGTCHYFANKLSFWLATIESNQQFQTPQRQTLKAGNVRDRVSRCQVCMKNT
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaacggactgcggttgctcgcgtccttcttagggttgttagtgtgcgtttcc
gcgcaatttttcacattatcaagtgcaaaccgaactggattgtacggaaaagacgatagt
tacagtggtagacaaaattatataagtagtgatacggaccgaacccgtttagatccatca
atatcatccgatggatcacattcttacggtgcagacgtgcattatccgcgtaacccttcc
gaagggcaaccgccgtctgcaacacacgagcaggatcctagaagaaatgaggaagacgac
tctgcagaagaagacgacgatttcgatgatcaaaatcgggacgataggcaagagtattac
aatcataacgcaccaggtggccaatcatcgcgtagatcatggtatgaaacatcatctggg
cacagacaaccggtcgattacccaccatctgacaatgagaacagagttgatagtgaaacc
gataaccgctatccttatcatgaatcttcagctaccgcttctcgtggacaaggcgatccc
aacagctataattacggatcacacagtcaggcaccagtgaatgtttccagcgaaacgagg
tcgtattattatgaaagttcgagcggacagcaaggacaaccaccaagcatttcgggacaa
gctccagacgaaggcacctataggcaaggagtttccagatacgaaaccggaggcggatca
aatccatactatgatccttcgaggccaggttcgccgcaatctcaaccgccatatgcacat
acgtctagttcttcgtccaattcttactacgaaacctccggtggtcagccagcaccagaa
tcaccccagtcgcctggattggacccctcacgtacatactactatggatcgtcgagtgga
caaggtgctccaggtgcgccacaacctcacccgccatccggccattcttccagctcatca
agcagttattactacgaatcttcaagcggacaagcgagccccggtggcgcacagcctgcc
tcgccttatggaccaggaggcgcatatccaggtgcgccgcaaccatcacatggacaaacg
tcagattcacgcagctaccattacgaatcatcaggcggacaagctgctccaggttcgcca
caacaaccgacttccggtcagacgagttcatcgagcagttatcattatgagtcgtcaagt
ggacaggcgtctccgggtgcccaacagccaccatcacctggacaaggttctccagattca
agctactcaaatagttactattatgagtcatccagtggccaaggatcctcacccggacaa
gcaccttcaggcgctcccggtcaatactcacaccaaggaagaggagatgtccgtaccgga
tatgaatcttctagcagccaagtttctagaacagaacaggacattcgtggcgcttatcct
agcgctccatacgccggaaggagaccatacgatagcagttatgatgttgtggaagccccc
aacagtgctttcggacctaaacgaggaaatgaaagatgcatacctaaatgttttgctgag
aaaggaagtagaggcttccctggattacctggtattccaggagaaaaaggtcagcgagga
tttcccggccccgaaggcgcaatgggatcgaaaggcgaaaaaggcgaatacggaccgatc
ggtccacgaggacctaaaggagatcgaggcaaaataggcgttcccggatttcctggcatc
aacggcgttccgggattacagggtccccctggtgcacccggaatacctggtatggatggg
tttaacggaaccgacggtagttcaggtgtgcctggtcaatcaggagaacaaggccctaga
ggttatcctggcagccctggaatgaagggaatgaaaggtgaagctgcgcattgcgaaatc
aacttgaaaggtcaaaaaggagagcccggacttaatggagtgacaggtccggcaggtttg
ccaggtccagttgggccactcggaaatccaggaatagcaggagaagtgggattacctggt
ccaagagggcctcctggattgaaaggccaaaagggtaacatgggattgggatacgaaggc
caaaagggcgaaaaaggatctaaaggtcaaactggtatgaagggagaagcggccgtttta
cccttcggaactgacacgcatattgttggaccaatgggagataaaggagataagggtgat
catggtgactatggaccactggggcaaaaaggggaacctggcccagaaggcgactatggc
atacctggtggtgttggcatgaaaggcgaaaaaggattaccaggtgcaccaggccctcgc
ggtagagacggatttcctggaattccgggtcctctgggtcaaaaaggagatcgcggagtt
gaaggattgccaggattacctggacgacctggtacaaaaggtgaacctggaagagatggt
ccagttggtccccaaggtttaagagggccacagggtccacccggaggtggaaaaggtaaa
cccggaccaccaggacctgcaggacctcgagggtaccccggacctatgggtccaaaagga
atggacgggttcgatggcgatcaaggacctcgaggacctattggacagcctggaggtcca
ggcgtgccaggtagacctggaccagaaggtgcgccaggcgaaaagggacacaaaggagac
tctggtgcagttggtttgccaggaggcgaaggtccaagaggtttccctggttcccaagga
cagcagggtcctagaggttttcctggtgaaaaaggtctttcgataattggacaaaaagga
tctgatggacttcctggtagagatggattgaaaggtttaaagggagaaaaaggttatcca
gggccgcggggaattccgggcgattctttggaaggaattccaggatcacctggtttgcct
ggaagacctggtgaaaagggagctgcaggtagacccggaaatcccggaatacctggattg
cacggagaaaaaggagatatcgggggtagatgtcaagattgtttaccaggagccaaaggg
gagaaaggagaccgaggatttgatggattaccaggaacacctggagcacgtgggcttcct
ggagaaagaggatatccaggtgtaccgggagcagatggtttatctggagcacccggtgcg
caaggaccacgcggaaaagatggcattcctggcaaaccgggatatgatggcgacaaaggt
gaacctgcgtttataccaggtgatttagtaagagcacctaagggcgataaaggagaacgt
ggcttgccggggatagctggtcctccgggacctattggacctgttggaccggtgggacca
tctggattacctggtttcccaggattgaagggtgacactggctatcaaggcttcccaggt
cctgatgggcgaccaggagacacaggaatacctggtgccaaaggtgaaaaaggtgcaagt
ataaagggagaaccaggcttccccggacaaaaaggcgcggctggttttaaaggtgaccca
ggagcaaccggtcccaaaggtgcaccaggctcgtgtccccaatcctttacagaaggattt
aaaggaaataagggcgaaaagggagagaaaggagaacttggtccaccaggttacaatggt
ttaactggagacaaaggtctgcgaggtctcacaggtgaacctggttcccctggccaaact
ggagcaccaggtcctgtaggtcaacgcggattgccaggtcctcgtggtgataagggtgag
atgggtcctttaggattcccaggagaaccaggtaaagatggtgatcgaggaatacctgga
attcctggaaccaagggtggtaagggagaacccgggatatctgcaataggaccaccaggg
ccacctggaatgcttggtccccaaggagaaaaaggtttgcccggattccccggaaaaact
ggattgccggggccatctggcatgccaggattacaaggagaaaagggagatgttggcata
cccggattgagtggaacgcccggttatccaggacagaaaggtgatacagggccatttggt
ccacctggtgcgccgggtgccccaggacgaccaggttatgacgggccaaagggcgaaatt
ggatttaagggagaaattggtcgaccagggttacaaggattccctggagagaaaggtgaa
ccaggagtacctggtgcagatggaccgaaaggtttcccaggccctagaggcgctcctgga
aaatcgggattatctggtgtcgatggacgaccaggagaaagaggtgaaaaaggggaccat
ggttatccagggccgccaggaccacctggattattgggagcgccaggtctaccaggactt
attggagagaagggtgatgtaggaccagtgggcggccctggtcttccaggtcaaaatgga
taccccggtgccaaaggtgaatctggtttacctggcttgcctggactgaagggcgaaaac
ggggcggcttcagagaaagggcaaaaaggcgagcctggcattccaggattgagaggttca
cccggtcagtcaggacgagatggattacatggcgctaaaggagaagctggtatacctggt
attggcattcctggtacccctggagcgaaaggcgagcgaggcatacctggtattgatgga
ttacctggtttgcgcgggcaaaaagggttacctggcttggcgggacaattaggtcagaaa
ggtgatcatggtttaactggtgctcctggtgcaccaggcgtggaaggaattgatggttta
cctggagaaaaaggagacattggtttccctggaatacctggattccaaggcgcgaaagga
gatgttggttacccaggtcaacatggttttgacggcgctaaaggtgaaaggggagccccg
ggtcctgctggacccataggattccctggattagaaggcaaaatgggagatcgtggtctt
cctggaccacttgttagtgtaaaaggtgaaaaaggtgaaccaggagcgtctggtttgcct
ggccgacaaggtgaaaaaggtgctatgggctttaatggtgcaactggcatagctggagaa
aagggaagtgcaggttatccaggccctaaaggtgacattggtctacctggtgctgccgga
cataaaggagacagaggtttcccaggtcaaccaggacttcctggtataactgtgaaagga
gagaaaggtctcccaggtcttcccggaaagaatggcagggatggattaccaggtattgtt
ggtgaaaagggcgaccgcggattccccggtcttcccggcgcggttggagttcgtggacct
ccaggcccaattggaccacaaggagaaaaaggagatcagggtgtgtcaggcctgcctggc
gcgccagggaatgatggttcacctggaagacctggatttgatggagctttcgggcttgct
ggagaaaagggagatcgcggtctaccgggattaatgggtgcacctggacagaagggagaa
cgtgggttaaccggaatacaaggtcctcctggttttaatggcgagaaaggagatcgcggt
ttgaatggttatcctggtgcgacaggtccgcaaggtccacctggggaaaaaggttttccg
ggtccgtcaggtcttgttggaattcaaggattcattggacaaaaaggagagaagggagag
atggcagtggtgatacccggacctaagggtgaccgaggcttccctggcacgcctggtagg
ccaggagagcgtggtgctccagggttagatggtcttcctggacagatcggtcctaaaggc
gaacctggtccaagcggaagaaatggatcacctgggccggttggtgctattggacccaaa
ggagatagaggttttgatggtttggcaggagcagttggagcgattgggttcacaggtgca
aaaggcgaacctggtgcgtcttgtgatgtgacacctgactacttaactggcatattgttg
gtccgacacagtcaaactgttgatgttcccacttgtgaacctggccatattaaactttgg
gatggttactcattgttatacattgaaggtaacgaaaaagcgcatcatcaagatttagga
tttgctgggtcatgcattagaaaattctccacaatgcctttcttgttctgtgattttaat
aatgtttgtaattacgctagtagaaatgatcgatcatactggttatctaccagtgcacct
atgcctatgatgcctgttgaagaaagtgcaattaggcaatatatatcaagatgcgttgta
tgtgaagctccagcaaacgtaattgctgttcacagtcaatccctgacattaccggaatgt
cctagtggatggagtggtttatggatcgggtacagttttgttatgcacactgctgcaggc
gcagaaggcggtggtcaatcactgtctagtcccggatcttgtttagaagatttccgtgcg
acaccattcattgaatgtaacggagcacgaggcacttgccattatttcgcgaacaaatta
agtttctggttggcaacaatcgaaagtaatcagcagttccaaacaccgcaaagacagacg
ctcaaggcaggtaacgtacgagaccgtgtaagtagatgtcaagtgtgcatgaagaacaca
tag
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integrated database retrieval system
