Photinus pyralis (common eastern firefly): 116170476
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Entry
116170476 CDS
T07438
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr04382
Cornified envelope formation
ppyr04512
ECM-receptor interaction
ppyr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116170476
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116170476
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116170476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppyr04147
]
116170476
00536 Glycosaminoglycan binding proteins [BR:
ppyr00536
]
116170476
Exosome [BR:
ppyr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116170476
Glycosaminoglycan binding proteins [BR:
ppyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116170476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116170476
NCBI-ProteinID:
XP_031342766
LinkDB
All DBs
Position
Unknown
AA seq
2220 aa
AA seq
DB search
MTNNGLRLLASFLGLLVCVSAQFFTLSSANRTGLYGKDDSYSGRQNYISSDTDRTRLDPS
ISSDGSHSYGADVHYPRNPSEGQPPSATHEQDPRRNEEDDSAEEDDDFDDQNRDDRQEYY
NHNAPGGQSSRRSWYETSSGHRQPVDYPPSDNENRVDSETDNRYPYHESSATASRGQGDP
NSYNYGSHSQAPVNVSSETRSYYYESSSGQQGQPPSISGQAPDEGTYRQGVSRYETGGGS
NPYYDPSRPGSPQSQPPYAHTSSSSSNSYYETSGGQPAPESPQSPGLDPSRTYYYGSSSG
QGAPGAPQPHPPSGHSSSSSSSYYYESSSGQASPGGAQPASPYGPGGAYPGAPQPSHGQT
SDSRSYHYESSGGQAAPGSPQQPTSGQTSSSSSYHYESSSGQASPGAQQPPSPGQGSPDS
SYSNSYYYESSSGQGSSPGQAPSGAPGQYSHQGRGDVRTGYESSSSQVSRTEQDIRGAYP
SAPYAGRRPYDSSYDVVEAPNSAFGPKRGNERCIPKCFAEKGSRGFPGLPGIPGEKGQRG
FPGPEGAMGSKGEKGEYGPIGPRGPKGDRGKIGVPGFPGINGVPGLQGPPGAPGIPGMDG
FNGTDGSSGVPGQSGEQGPRGYPGSPGMKGMKGEAAHCEINLKGQKGEPGLNGVTGPAGL
PGPVGPLGNPGIAGEVGLPGPRGPPGLKGQKGNMGLGYEGQKGEKGSKGQTGMKGEAAVL
PFGTDTHIVGPMGDKGDKGDHGDYGPLGQKGEPGPEGDYGIPGGVGMKGEKGLPGAPGPR
GRDGFPGIPGPLGQKGDRGVEGLPGLPGRPGTKGEPGRDGPVGPQGLRGPQGPPGGGKGK
PGPPGPAGPRGYPGPMGPKGMDGFDGDQGPRGPIGQPGGPGVPGRPGPEGAPGEKGHKGD
SGAVGLPGGEGPRGFPGSQGQQGPRGFPGEKGLSIIGQKGSDGLPGRDGLKGLKGEKGYP
GPRGIPGDSLEGIPGSPGLPGRPGEKGAAGRPGNPGIPGLHGEKGDIGGRCQDCLPGAKG
EKGDRGFDGLPGTPGARGLPGERGYPGVPGADGLSGAPGAQGPRGKDGIPGKPGYDGDKG
EPAFIPGDLVRAPKGDKGERGLPGIAGPPGPIGPVGPVGPSGLPGFPGLKGDTGYQGFPG
PDGRPGDTGIPGAKGEKGASIKGEPGFPGQKGAAGFKGDPGATGPKGAPGSCPQSFTEGF
KGNKGEKGEKGELGPPGYNGLTGDKGLRGLTGEPGSPGQTGAPGPVGQRGLPGPRGDKGE
MGPLGFPGEPGKDGDRGIPGIPGTKGGKGEPGISAIGPPGPPGMLGPQGEKGLPGFPGKT
GLPGPSGMPGLQGEKGDVGIPGLSGTPGYPGQKGDTGPFGPPGAPGAPGRPGYDGPKGEI
GFKGEIGRPGLQGFPGEKGEPGVPGADGPKGFPGPRGAPGKSGLSGVDGRPGERGEKGDH
GYPGPPGPPGLLGAPGLPGLIGEKGDVGPVGGPGLPGQNGYPGAKGESGLPGLPGLKGEN
GAASEKGQKGEPGIPGLRGSPGQSGRDGLHGAKGEAGIPGIGIPGTPGAKGERGIPGIDG
LPGLRGQKGLPGLAGQLGQKGDHGLTGAPGAPGVEGIDGLPGEKGDIGFPGIPGFQGAKG
DVGYPGQHGFDGAKGERGAPGPAGPIGFPGLEGKMGDRGLPGPLVSVKGEKGEPGASGLP
GRQGEKGAMGFNGATGIAGEKGSAGYPGPKGDIGLPGAAGHKGDRGFPGQPGLPGITVKG
EKGLPGLPGKNGRDGLPGIVGEKGDRGFPGLPGAVGVRGPPGPIGPQGEKGDQGVSGLPG
APGNDGSPGRPGFDGAFGLAGEKGDRGLPGLMGAPGQKGERGLTGIQGPPGFNGEKGDRG
LNGYPGATGPQGPPGEKGFPGPSGLVGIQGFIGQKGEKGEMAVVIPGPKGDRGFPGTPGR
PGERGAPGLDGLPGQIGPKGEPGPSGRNGSPGPVGAIGPKGDRGFDGLAGAVGAIGFTGA
KGEPGASCDVTPDYLTGILLVRHSQTVDVPTCEPGHIKLWDGYSLLYIEGNEKAHHQDLG
FAGSCIRKFSTMPFLFCDFNNVCNYASRNDRSYWLSTSAPMPMMPVEESAIRQYISRCVV
CEAPANVIAVHSQSLTLPECPSGWSGLWIGYSFVMHTAAGAEGGGQSLSSPGSCLEDFRA
TPFIECNGARGTCHYFANKLSFWLATIESNQQFQTPQRQTLKAGNVRDRVSRCQVCMKNT
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaacggactgcggttgctcgcgtccttcttagggttgttagtgtgcgtttcc
gcgcaatttttcacattatcaagtgcaaaccgaactggattgtacggaaaagacgatagt
tacagtggtagacaaaattatataagtagtgatacggaccgaacccgtttagatccatca
atatcatccgatggatcacattcttacggtgcagacgtgcattatccgcgtaacccttcc
gaagggcaaccgccgtctgcaacacacgagcaggatcctagaagaaatgaggaagacgac
tctgcagaagaagacgacgatttcgatgatcaaaatcgggacgataggcaagagtattac
aatcataacgcaccaggtggccaatcatcgcgtagatcatggtatgaaacatcatctggg
cacagacaaccggtcgattacccaccatctgacaatgagaacagagttgatagtgaaacc
gataaccgctatccttatcatgaatcttcagctaccgcttctcgtggacaaggcgatccc
aacagctataattacggatcacacagtcaggcaccagtgaatgtttccagcgaaacgagg
tcgtattattatgaaagttcgagcggacagcaaggacaaccaccaagcatttcgggacaa
gctccagacgaaggcacctataggcaaggagtttccagatacgaaaccggaggcggatca
aatccatactatgatccttcgaggccaggttcgccgcaatctcaaccgccatatgcacat
acgtctagttcttcgtccaattcttactacgaaacctccggtggtcagccagcaccagaa
tcaccccagtcgcctggattggacccctcacgtacatactactatggatcgtcgagtgga
caaggtgctccaggtgcgccacaacctcacccgccatccggccattcttccagctcatca
agcagttattactacgaatcttcaagcggacaagcgagccccggtggcgcacagcctgcc
tcgccttatggaccaggaggcgcatatccaggtgcgccgcaaccatcacatggacaaacg
tcagattcacgcagctaccattacgaatcatcaggcggacaagctgctccaggttcgcca
caacaaccgacttccggtcagacgagttcatcgagcagttatcattatgagtcgtcaagt
ggacaggcgtctccgggtgcccaacagccaccatcacctggacaaggttctccagattca
agctactcaaatagttactattatgagtcatccagtggccaaggatcctcacccggacaa
gcaccttcaggcgctcccggtcaatactcacaccaaggaagaggagatgtccgtaccgga
tatgaatcttctagcagccaagtttctagaacagaacaggacattcgtggcgcttatcct
agcgctccatacgccggaaggagaccatacgatagcagttatgatgttgtggaagccccc
aacagtgctttcggacctaaacgaggaaatgaaagatgcatacctaaatgttttgctgag
aaaggaagtagaggcttccctggattacctggtattccaggagaaaaaggtcagcgagga
tttcccggccccgaaggcgcaatgggatcgaaaggcgaaaaaggcgaatacggaccgatc
ggtccacgaggacctaaaggagatcgaggcaaaataggcgttcccggatttcctggcatc
aacggcgttccgggattacagggtccccctggtgcacccggaatacctggtatggatggg
tttaacggaaccgacggtagttcaggtgtgcctggtcaatcaggagaacaaggccctaga
ggttatcctggcagccctggaatgaagggaatgaaaggtgaagctgcgcattgcgaaatc
aacttgaaaggtcaaaaaggagagcccggacttaatggagtgacaggtccggcaggtttg
ccaggtccagttgggccactcggaaatccaggaatagcaggagaagtgggattacctggt
ccaagagggcctcctggattgaaaggccaaaagggtaacatgggattgggatacgaaggc
caaaagggcgaaaaaggatctaaaggtcaaactggtatgaagggagaagcggccgtttta
cccttcggaactgacacgcatattgttggaccaatgggagataaaggagataagggtgat
catggtgactatggaccactggggcaaaaaggggaacctggcccagaaggcgactatggc
atacctggtggtgttggcatgaaaggcgaaaaaggattaccaggtgcaccaggccctcgc
ggtagagacggatttcctggaattccgggtcctctgggtcaaaaaggagatcgcggagtt
gaaggattgccaggattacctggacgacctggtacaaaaggtgaacctggaagagatggt
ccagttggtccccaaggtttaagagggccacagggtccacccggaggtggaaaaggtaaa
cccggaccaccaggacctgcaggacctcgagggtaccccggacctatgggtccaaaagga
atggacgggttcgatggcgatcaaggacctcgaggacctattggacagcctggaggtcca
ggcgtgccaggtagacctggaccagaaggtgcgccaggcgaaaagggacacaaaggagac
tctggtgcagttggtttgccaggaggcgaaggtccaagaggtttccctggttcccaagga
cagcagggtcctagaggttttcctggtgaaaaaggtctttcgataattggacaaaaagga
tctgatggacttcctggtagagatggattgaaaggtttaaagggagaaaaaggttatcca
gggccgcggggaattccgggcgattctttggaaggaattccaggatcacctggtttgcct
ggaagacctggtgaaaagggagctgcaggtagacccggaaatcccggaatacctggattg
cacggagaaaaaggagatatcgggggtagatgtcaagattgtttaccaggagccaaaggg
gagaaaggagaccgaggatttgatggattaccaggaacacctggagcacgtgggcttcct
ggagaaagaggatatccaggtgtaccgggagcagatggtttatctggagcacccggtgcg
caaggaccacgcggaaaagatggcattcctggcaaaccgggatatgatggcgacaaaggt
gaacctgcgtttataccaggtgatttagtaagagcacctaagggcgataaaggagaacgt
ggcttgccggggatagctggtcctccgggacctattggacctgttggaccggtgggacca
tctggattacctggtttcccaggattgaagggtgacactggctatcaaggcttcccaggt
cctgatgggcgaccaggagacacaggaatacctggtgccaaaggtgaaaaaggtgcaagt
ataaagggagaaccaggcttccccggacaaaaaggcgcggctggttttaaaggtgaccca
ggagcaaccggtcccaaaggtgcaccaggctcgtgtccccaatcctttacagaaggattt
aaaggaaataagggcgaaaagggagagaaaggagaacttggtccaccaggttacaatggt
ttaactggagacaaaggtctgcgaggtctcacaggtgaacctggttcccctggccaaact
ggagcaccaggtcctgtaggtcaacgcggattgccaggtcctcgtggtgataagggtgag
atgggtcctttaggattcccaggagaaccaggtaaagatggtgatcgaggaatacctgga
attcctggaaccaagggtggtaagggagaacccgggatatctgcaataggaccaccaggg
ccacctggaatgcttggtccccaaggagaaaaaggtttgcccggattccccggaaaaact
ggattgccggggccatctggcatgccaggattacaaggagaaaagggagatgttggcata
cccggattgagtggaacgcccggttatccaggacagaaaggtgatacagggccatttggt
ccacctggtgcgccgggtgccccaggacgaccaggttatgacgggccaaagggcgaaatt
ggatttaagggagaaattggtcgaccagggttacaaggattccctggagagaaaggtgaa
ccaggagtacctggtgcagatggaccgaaaggtttcccaggccctagaggcgctcctgga
aaatcgggattatctggtgtcgatggacgaccaggagaaagaggtgaaaaaggggaccat
ggttatccagggccgccaggaccacctggattattgggagcgccaggtctaccaggactt
attggagagaagggtgatgtaggaccagtgggcggccctggtcttccaggtcaaaatgga
taccccggtgccaaaggtgaatctggtttacctggcttgcctggactgaagggcgaaaac
ggggcggcttcagagaaagggcaaaaaggcgagcctggcattccaggattgagaggttca
cccggtcagtcaggacgagatggattacatggcgctaaaggagaagctggtatacctggt
attggcattcctggtacccctggagcgaaaggcgagcgaggcatacctggtattgatgga
ttacctggtttgcgcgggcaaaaagggttacctggcttggcgggacaattaggtcagaaa
ggtgatcatggtttaactggtgctcctggtgcaccaggcgtggaaggaattgatggttta
cctggagaaaaaggagacattggtttccctggaatacctggattccaaggcgcgaaagga
gatgttggttacccaggtcaacatggttttgacggcgctaaaggtgaaaggggagccccg
ggtcctgctggacccataggattccctggattagaaggcaaaatgggagatcgtggtctt
cctggaccacttgttagtgtaaaaggtgaaaaaggtgaaccaggagcgtctggtttgcct
ggccgacaaggtgaaaaaggtgctatgggctttaatggtgcaactggcatagctggagaa
aagggaagtgcaggttatccaggccctaaaggtgacattggtctacctggtgctgccgga
cataaaggagacagaggtttcccaggtcaaccaggacttcctggtataactgtgaaagga
gagaaaggtctcccaggtcttcccggaaagaatggcagggatggattaccaggtattgtt
ggtgaaaagggcgaccgcggattccccggtcttcccggcgcggttggagttcgtggacct
ccaggcccaattggaccacaaggagaaaaaggagatcagggtgtgtcaggcctgcctggc
gcgccagggaatgatggttcacctggaagacctggatttgatggagctttcgggcttgct
ggagaaaagggagatcgcggtctaccgggattaatgggtgcacctggacagaagggagaa
cgtgggttaaccggaatacaaggtcctcctggttttaatggcgagaaaggagatcgcggt
ttgaatggttatcctggtgcgacaggtccgcaaggtccacctggggaaaaaggttttccg
ggtccgtcaggtcttgttggaattcaaggattcattggacaaaaaggagagaagggagag
atggcagtggtgatacccggacctaagggtgaccgaggcttccctggcacgcctggtagg
ccaggagagcgtggtgctccagggttagatggtcttcctggacagatcggtcctaaaggc
gaacctggtccaagcggaagaaatggatcacctgggccggttggtgctattggacccaaa
ggagatagaggttttgatggtttggcaggagcagttggagcgattgggttcacaggtgca
aaaggcgaacctggtgcgtcttgtgatgtgacacctgactacttaactggcatattgttg
gtccgacacagtcaaactgttgatgttcccacttgtgaacctggccatattaaactttgg
gatggttactcattgttatacattgaaggtaacgaaaaagcgcatcatcaagatttagga
tttgctgggtcatgcattagaaaattctccacaatgcctttcttgttctgtgattttaat
aatgtttgtaattacgctagtagaaatgatcgatcatactggttatctaccagtgcacct
atgcctatgatgcctgttgaagaaagtgcaattaggcaatatatatcaagatgcgttgta
tgtgaagctccagcaaacgtaattgctgttcacagtcaatccctgacattaccggaatgt
cctagtggatggagtggtttatggatcgggtacagttttgttatgcacactgctgcaggc
gcagaaggcggtggtcaatcactgtctagtcccggatcttgtttagaagatttccgtgcg
acaccattcattgaatgtaacggagcacgaggcacttgccattatttcgcgaacaaatta
agtttctggttggcaacaatcgaaagtaatcagcagttccaaacaccgcaaagacagacg
ctcaaggcaggtaacgtacgagaccgtgtaagtagatgtcaagtgtgcatgaagaacaca
tag
DBGET
integrated database retrieval system
