Photinus pyralis (common eastern firefly): 116170477
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Entry
116170477 CDS
T07438
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr04512
ECM-receptor interaction
ppyr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116170477
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116170477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppyr04147
]
116170477
00536 Glycosaminoglycan binding proteins [BR:
ppyr00536
]
116170477
Exosome [BR:
ppyr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116170477
Glycosaminoglycan binding proteins [BR:
ppyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116170477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116170477
NCBI-ProteinID:
XP_031342767
LinkDB
All DBs
Position
Unknown
AA seq
2043 aa
AA seq
DB search
MPPWPRCCRAFTAALALILLFFVESTYSFAQSPFAGYQKSYKCDCRGLKGQPGAPGITGM
QAVQGDYGDIGPEGPFGPKGEKGEAGSYGGDGEKGTRGDDGERGRQGPMGHSGYPGEAGP
RGPQGLDGCNGTDGTPGAPGIPGLHGVRGSLGGDGLKGPPGDSGEGGGNSIGTKGDMGEP
GLPGFPGGYGRPGPAGPPGYSGLQGYPGIVGEQGPPGPRGDTGESTKGLPGLPGEPGDEG
DIGIPGDLVNDGGSIIAPPTVTKIKGPKGMKGALGTIGNRGRKGEMGVRGLAGLPGARGE
LGAKGEQGLDGQIGKQGRVGPSGPSGEKGDKGAPGYEGAAGYDGEKGHIGDAGFRGAPGV
QGIEGEPGIYDPYLDEEGKLGVVGKQGPEGAVGERGMAGTPGRPGPPGPIGPPGLPGIPG
DVGLPGIRGISIKGERGDDGLPGFHGLQGKPGLPGPDGLIGEKGFPGLTVEGPPGLDGLP
GIEGFPGPIGDRGDIGEFGSKGFSGQGQAIVGPAGDPGPPGLPGLLGDFGTPGFSGLPGE
KGKRGDDCGICRGGAPGWKGELGDAGRSGRAGGIGYAGLPGPRGPKGVTGKTGLPGEQGP
QGLPGAAGLQGFTGEKGRKGELVYPPSGQVEPAEPGYPGFPGKEGLPGFRGPTGPQGPLG
LDGPKGERGKIGPQGLPGKDGFPGLNGLPGLKGDPASVPKEYLRGDRGFDGYPGEPGAAG
EYGGEGEPGDAGIFLADIKGSRGIKGDLGGRGWDGFKGESGPTGDVGFPGLPGITGSMGP
SITGPVGLKGFPGTIGMEGPRGHPGLPGRPGTDGSHGLPGLKGNRGDTGLSILNGEIGVP
GLVGRKGEPGDFGPDGYPGREGTSGVKGIKGQKGAPGYAGLLGVTGTKGQTGAIVVGPPG
LPGEPGLPGLFGMMGQTGQKGEDGYPGFSGMKGIKGDIGLLGRIGLIGEIGEEGFPGRFG
VMGLPGRPGEVGLKGDDGFPGLPGLEGKQGYPGQRGLKGARGDIGLRGLPGNAGLPGLPG
LQGDPGAFGISGQKGEPAFSGQQGDIGEPGYRGLPGFDGLPGLNGAPGERGDLGQNWPGE
YGATGIKGDAGFPGRNGAPGLMGEQGDLGLPGPPGYRGDPGFQGEPGRSGRRGIPGFKGE
RGGPGLPGISGPKGEKGAFGEPGRTGKPGFPGDVGLPGAVGPQGVPGIKGKRGLPGFASF
GEGKRGDVGLTGIHGLPGAIGEPGVPGFPGAPGPRGLPGDIGFIGLQGDFGIVGVKGIRG
EEGEVGLPGLPGVNPERGDEGRAGLDGLVGLSGVAGQKGAPGDYGADGAIGFPGEPGPVV
VGIKGIRGDAGFPGQPGRPGKFGLPGNNGRPGARGAKGMQGDIGTASINFKGEEGDIGFR
GLPGPNGAKGELGEPGSVGLPGPIGPRGLRGPTGDVGLPGAQGSVGFQGEKGDRGEFGQV
IAGLIGDTGFAGADGLPGMEGIPGKSGARGYSGAPGEPGLPGMQGLPGFQGPKGVQGDNG
LPGQVGLQGAFGAPGIRGDPAPSPPGPKSRGFYFTRHSQSELTPICPKDTIKMWDGYSLL
HIMGDSKAHGQDLGAPGSCLRKFSTMPYLFCNLNDVCDYAQRNDYSYWLSTNEPMPVMMT
PIPAPEVGRYISRCSVCEAPTRIIAVHSQSQTIPECPTGWEELWIGYSFMMHTDAGAQGS
GQPLVSPGSCLEEFRPRPFIECHAHGRCNYFTTAYSYWLATIEDYAMFTKPRQQTLKAGM
DLTSRISRCAVCIRRRYHSERSQPRPGGGPTYGVPQPSEIQTYPIDRRYNTGDPRQFGRA
GQSGVSTENRFGGQSQFKSQSQSGSQSQSSVDSQYGSQSQSSVQGQYGSQSQSGAQSSYI
TQGQTQSGGQSQYGGQAQYGSQGQPGVQTQYGSQTHQYGSEGQSGQTQSGSAGQVQYGGQ
RQYGPQTRQRPPTQYGTQYQGQGQSGSQTHYETQSGAEGQYGGHSQTGGSVQYGPQYNRG
EGQYRPQAQPGAQTPYQYSNQQNPNLYLNNLENRRRQNGGRRQRLRKRGQEKLNKPENEV
DAS
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtggccgagatgttgccgggcgtttaccgccgccttggcgttaatactacta
tttttcgttgaaagcacatattcttttgcacaatcgccttttgctggctaccaaaagagt
tacaaatgcgactgcaggggtttaaaagggcagcctggtgcaccaggtatcactggaatg
caagctgtccaaggtgattacggtgatattggaccagaaggtccattcggtccaaaaggt
gaaaaaggtgaagctggatcttacggaggagatggcgagaaagggactaggggcgatgat
ggtgaaagaggacgacaaggaccaatgggccattcggggtacccaggcgaagcaggacct
cgaggccctcagggattggatggatgtaatggaaccgatggcactccaggcgctccaggt
attcccggcttgcacggggtgcgaggatctttgggtggtgacggtttaaaagggccacct
ggtgattcgggtgaaggtggtggaaattctattggaacaaagggagatatgggagaacca
ggacttcccggcttccctggtggatacggacgacctggaccagctggaccgccgggatat
agtggactgcaaggatacccgggtattgttggagagcaaggtccgcccggccccagaggt
gacacgggagaaagtaccaaaggattacctggattacccggtgaacctggagatgaagga
gatattggtatacctggcgatctagtcaatgacggtggttcaataattgccccgccaact
gtgacaaaaataaaaggaccaaaaggaatgaaaggggcactaggaacaataggtaatcgc
ggaagaaagggagaaatgggtgtgcgtggactggcgggtttacctggtgctcgtggtgaa
ttgggtgcaaaaggagaacaaggtttggatgggcaaattggcaaacaagggcgtgtaggc
ccaagtggaccaagtggcgaaaaaggtgataaaggagcacctggttatgagggagctgca
ggttacgatggagaaaagggacatattggagacgccggtttcaggggagcacccggtgtt
cagggcatagaaggagaaccgggtatctacgatccatatttggatgaagaaggtaaattg
ggtgtggtgggaaagcaaggtcctgagggagctgtcggagagaggggaatggccggaaca
ccgggaagaccgggacccccaggtccaattggtccacctggattacctggcatcccaggt
gatgtaggtttaccaggaatccgaggaattagtattaaaggagaaagaggtgacgatggt
ttgccaggattccatggtttacaaggaaaaccaggattaccaggaccagatggactaatt
ggagaaaagggttttccaggtttaactgttgagggtccaccaggattagatggattacca
ggtattgaagggttcccagggccaattggagacagaggtgatatcggagaatttggatca
aaaggtttctctggccaaggtcaagcaattgttggtcccgcaggtgacccgggtccacct
ggccttccaggtctcctaggtgattttggtacaccaggttttagtggtcttcctggtgag
aagggaaaacgaggcgacgattgcggaatatgcagaggaggtgctcctggctggaaaggt
gaactgggagatgcaggaagaagtggccgggccggaggtataggatatgcaggattacct
gggcctagagggcccaagggggtaactggcaaaaccggtttgcctggtgaacaggggcca
caagggttacctggtgctgctggtttacaaggatttactggagaaaaaggacgaaaagga
gagcttgtatatccaccttctggtcaagttgaacccgccgaaccagggtatcctggattt
cctggaaaagaaggtctccctggctttaggggccctactggcccacagggacctcttggc
ttagacggtccaaagggagaaagaggtaaaattggtccacaaggattgccaggcaaggat
ggattccccggattgaatggattgcctgggttaaaaggagatcccgcttcagtccctaaa
gagtacttaagaggtgaccgtggattcgatggatacccgggagaaccaggagcagcagga
gaatatggaggtgaaggtgaaccaggagatgctggcatatttttggcagatattaaagga
agtcgtggaattaaaggagatcttgggggccgaggatgggatggctttaaaggagaaagt
ggtccgactggagatgttggtttccctggtcttcccggcataacgggaagtatgggacca
tcaattacagggcctgtcggacttaaaggcttccctggaacaatcggaatggaaggtcca
cgtggtcatccaggattacccggaaggcctggtactgatggtagtcatggcctacctggc
ctgaaaggaaaccgcggtgatacaggattaagtattcttaatggagaaataggagtacca
gggctcgttggcagaaaaggagaacctggtgattttggtcctgacggttatcctggtaga
gaaggtacatcaggcgttaaaggtatcaaaggtcagaagggtgcaccaggatatgcagga
ctactaggagtaactggaaccaaaggacaaacgggagcgatagtagtagggcctccagga
cttcctggtgagcctggattgccaggtttgtttggaatgatgggacaaacgggacaaaaa
ggtgaagacggttaccctggtttctctggaatgaaaggtattaaaggagacattgggcta
ttgggaagaataggtttgataggggaaataggcgaggaaggcttccctgggcgctttggg
gtaatgggtctaccgggaagaccgggagaggtcggattaaagggagatgacggattccct
gggctacctggattggaagggaaacaaggttaccctggtcaacgaggattgaagggggct
cgcggcgatatagggttgagagggttgcctggaaatgcaggtttgccaggtttaccaggg
ttgcaaggagatccgggtgcttttggtattagcggacaaaaaggagaaccggctttcagc
gggcaacaaggcgatatcggagaaccaggttacagaggtttaccaggatttgatgggctt
ccgggacttaatggggcacctggggaacgtggcgacctaggtcaaaattggcctggagaa
tatggagcaactggtattaaaggcgacgcgggatttccgggaagaaatggcgcacctgga
ttaatgggagaacaaggagacttaggtctacctgggccgccaggatatcgcggtgatcca
ggttttcaaggtgaaccaggacgttcgggaagacgaggaataccaggttttaagggcgaa
aggggcgggccaggtctgccaggaatttcgggaccaaaaggagagaaaggtgcatttgga
gaacctggccgaactggtaaacccggttttcctggagatgttgggttacctggtgcagta
ggtccacagggtgtccctggtataaaaggtaaacgagggctgcccggatttgcttcgttt
ggtgaaggcaaaagaggtgacgttggtttgaccggaattcacggattacctggagctatt
ggagaacctggcgtgccaggctttcccggtgctccagggcctcgaggtttgccaggagat
attggattcattggtttgcaaggagattttggaattgttggtgttaaaggtataagagga
gaagaaggagaagttggccttccaggattaccaggtgtaaatcccgaacgaggtgacgaa
ggccgagccggattagatggcttagttggcttgagtggtgtggctggccagaaaggtgct
cctggggattacggagcggacggagccattggttttccgggagaacctggcccagttgtt
gtaggaattaagggaatacgtggtgatgccggtttcccgggacaacctggcaggcctgga
aagtttgggttaccaggaaacaacggcagacctggcgccagaggggctaagggtatgcag
ggagatattggtactgcttctatcaattttaaaggcgaagagggcgatattggtttccga
ggcttgcccggccctaacggtgctaaaggcgagttaggcgagccaggaagtgtaggattg
ccaggcccaattggcccaagaggtcttaggggaccaactggggacgttggccttccagga
gcacaaggttctgtaggttttcaaggtgaaaaaggtgaccgtggagagtttggacaagtc
atcgccgggttaattggtgatactggatttgctggagcagatggcctacctggcatggaa
ggcatacctggaaaatctggtgcacgtggctactctggtgctccaggcgagccaggatta
cctggcatgcaagggttgccaggtttccaaggtcctaaaggcgtgcagggtgacaacggt
ttaccaggacaagtcggtttacaaggtgcttttggagctcctggaatccgtggtgaccca
gctccgtcaccgcccggtcccaaaagtagagggttttactttacaagacactctcaatct
gaacttacaccgatttgtcccaaagacactataaaaatgtgggatggatattcattactg
cacattatgggagattcgaaagcccatggccaagatttaggagcaccaggaagctgttta
agaaaattcagcaccatgccatacttgttctgtaacttaaatgatgtttgcgactatgcg
caacgaaatgattatagttactggttatccacgaatgaaccaatgcctgtaatgatgact
cccatacccgctcctgaagtaggaagatacatttcaaggtgttctgtatgtgaagctcca
acaagaattattgcagtgcacagtcaaagtcaaactataccagaatgtcctacaggttgg
gaagaactatggattggttacagtttcatgatgcacactgatgctggtgcacaaggttct
ggacaacctttggtatctccaggttcctgtttggaagaatttagaccacgacctttcatc
gagtgtcacgcccatggtcgatgcaattactttactaccgcatattcatactggctagcc
actattgaagattatgccatgtttacaaaaccacgccaacaaacattaaaagcaggaatg
gatttaacttcccgcatcagtcgatgcgcagtatgtattcggcgtcgttatcattcagaa
aggtcacaaccacgccccggtgggggtcctacctatggtgttcctcagcctagcgaaatt
cagacataccctattgacagaagatataatacaggagatcctcggcaatttggcagggca
ggtcaatctggtgtaagcactgagaacagatttgggggacaaagtcagttcaagtctcaa
agtcaatctggatcccaaagtcaatccagtgttgatagtcaatacggatcccaaagtcaa
tctagtgttcaaggtcaatacggatcccaaagtcagtctggagcacaaagttcatatata
acgcaaggccaaactcaatcgggcggtcaaagccaatatggaggtcaggctcaatatgga
tcccaaggtcaacctggggttcagactcaatatggaagccagactcatcagtatggctct
gaaggtcaatctggtcaaacgcagagtggatcagcaggtcaggttcaatatggtggacag
cgccagtacggccctcaaactcgacaaagacctccaactcaatatggtacacaatatcaa
ggccaagggcaatctggatcccaaacccattatgaaacacaaagtggtgctgaagggcaa
tacggaggacattctcagacaggtgggtcagttcaatatgggccccaatacaacagaggc
gaaggtcaatacagacctcaagctcagccaggtgcccaaactccttaccaatacagcaac
caacaaaaccccaacctctacctaaataatttagaaaatcgaagaagacagaatgggggt
agacgccaaaggctaaggaaaaggggacaggaaaaactaaacaaacctgaaaatgaagtc
gatgcttcgtaa
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