Photinus pyralis (common eastern firefly): 116170513
Help
Entry
116170513 CDS
T07438
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116170513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116170513
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116170513
mRNA degradation factors
5'-3' decay
Decapping complex
116170513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
PIH1_CS
TOR1L1_C
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
116170513
NCBI-ProteinID:
XP_031342827
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MDSALITAEQNITQNISFNGSDKEYSIEILGQEVTVNCSAGNHNHGSSKVKLTDVVDYNW
ELKFYVGQLLAVHLNGHVIAYGMKGKKGGMIRVTNLETNRRALIREMNGLVQDISFALIP
QQIVLACVDEEGSLFVYNIDDRSDAIECTLLMHVIHPTSQASNYRVIWCPYVPSYGEDSD
TLDDPAKLLVLLNGSTVEVWDVSIVNNRYGTGPLQPHTSYEGYVEINGHVLDVVDASFSP
DGTALATASLDGFVKFFQVYMVENEKPRCLHEWNPHQGETLSCLLFLDNVHTYGPDSRFW
KFAITGSKYNAELKIWSCETWSCLQTIKFVPNPTCPTSQLLLKARLDMTGQYLLLSDINN
RIMYVLQLEKHDSERVATVISISEFLLPAPVLSYCITSAEICKFRYTSSSDDLCLCEANE
DETNISAIVIKLYVVQPKKLQECNITYQPDSLSVQNNSEMFTLDSSTDTLINLNENKADD
SSAKDLPKLNDLQTSVNYLIQQQTGQAALNLMTPDAFSSPIQNSPTNKRNSHGSNSTSPI
MLKPEKISEDVKIENLMDADDVLQFDRPLKENYASAGSSPSREVQEILSFKNSQEYFENL
TKDTSPEIETKNNFNQTDNLMFNENSSSEVVWPNIPIMKANEIVEEENRKLAAAESITDN
RNDLGSDKTHLQEINLRLNSLENLIRDQHAHIQKLQQEVNKNNIKDDLRGMFAKELDVAL
SRSQIQQAKLFENYVNIQKSVEQEHIENLIASTTQILTKQITEKLQIIIGHDIKNIVLPS
IMNTFESLKHQLFVEYTQKLTNTDHLLKDNISKLVTSKAVADSLSLSIVNIIKPSLEECY
KEMMGTTLIPSWERVCGTMFQQIHDTFTKGTKEYTASVENYMDKQRHAQDKGADLISQMQ
KVSDNIKKNSDKLPANVSQEIEKQLNISFANMQDRLTLMLANLVSEQVKLGFKNHAAILE
DSVINAVRSRAVTPSPHVFDSQAQLAHIQQLLGKGQIDVAFQQALSASDLSLVVHVCEKT
NPQEVFKIGGCLLTQPVILSLIQQLSADLVRNTELKQKYIEEAVLSLEPTNLITKEHMPI
VLKELQQNLNNFISSHPNHSCVRNMRRLHLMTQSLLTP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcactaataaccgcagaacaaaatatcacccaaaatatctcattcaatgga
tcggataaggaatattccatcgagatactcggacaagaggtcactgttaattgtagcgcc
ggtaaccacaatcatggcagttcaaaagtcaagctaactgacgttgttgactataactgg
gagctgaagttctacgttgggcagctgctagcagtacatttgaatggtcacgtaatagcc
tacggaatgaaaggaaagaaaggtggaatgatacgtgtcaccaacctggaaactaatcgt
agagccctgattagagagatgaatggtttagttcaagatatttcctttgctttaattccc
caacaaatagttttggcgtgtgtcgatgaggaaggcagtctttttgtgtataatatcgat
gataggagtgacgcaattgaatgcacattattaatgcacgttattcatcccacatcccaa
gcaagtaattacagagtaatatggtgcccttacgtaccatcgtatggagaagactcagat
actttagatgatcccgctaaactattggtgctgttaaatggaagcacagtcgaagtctgg
gacgttagtattgtaaataatcgttacggaactggacctttgcaaccgcatacaagttat
gaaggctacgttgaaatcaacgggcacgtgctcgacgtagtggacgcatcattttcgccc
gacggtactgcgttagcgaccgccagtttggacggatttgtgaaattttttcaagtgtac
atggttgaaaatgaaaagcctcggtgtctgcatgagtggaatccacaccaaggggaaacg
ctgtcttgtctcctatttttggataatgtacacacctatggacctgattccaggttttgg
aagttcgcaataaccggatccaaatataacgcagaacttaaaatttggtcctgtgaaacg
tggagctgtttacaaactatcaagttcgtacctaacccgacgtgtcctacgtctcagtta
ttattaaaagcccgtctagatatgacaggtcaatatttgttattatctgatattaataac
agaataatgtatgtcctgcaactagagaaacacgattccgaaagagttgcaactgtgata
tctatttcagaatttttattacctgcaccagttttgagctattgcattacaagtgcagaa
atttgtaaatttcgctacacaagtagttctgatgatctgtgtttatgtgaagctaacgaa
gatgaaactaacatatccgctattgttataaaattgtatgtggttcaacccaaaaaattg
caggagtgtaatattacctatcaacctgacagtctttcggttcagaataacagtgaaatg
ttcacattagattcatccacagacacactaattaacttgaacgagaataaggcggacgac
tccagcgccaaagacctacctaaattgaacgatttgcaaacgtctgtaaattatttaatc
caacaacaaacgggccaagctgctttaaatttaatgactccggacgcgttcagttcgcca
attcagaacagtcccactaacaaaagaaattcgcacggcagtaactcgacctcccctatc
atgcttaagccagaaaagatatccgaagatgtcaaaattgaaaatttaatggacgccgat
gacgtacttcagtttgacagaccgctaaaggaaaactacgccagcgccggctccagtccg
agccgcgaagtgcaagagattttatcgtttaaaaacagccaggagtatttcgaaaacctt
accaaagacactagtcccgaaatcgaaactaaaaataattttaatcaaactgacaatttg
atgtttaacgagaacagcagtagcgaagtggtttggcccaatattcctattatgaaagcg
aatgaaatagttgaagaggagaatcgcaagctggcggcggccgaaagtattaccgacaat
cgaaatgacttaggtagtgataaaactcaccttcaagagatcaatttgcgtttaaacagc
ttggagaatctgatccgtgaccaacacgctcacattcaaaaattacaacaagaggtgaat
aaaaataatataaaagatgacttgaggggaatgttcgcaaaggaattggatgtggccttg
tccagaagtcaaattcaacaggcgaagttgtttgagaattatgtaaatatacagaaaagt
gtagagcaagagcacatcgaaaatcttatagcgagtaccactcaaattttaacaaaacaa
ataacggagaagttacaaataattatcgggcacgatataaagaatatcgttttaccttcc
ataatgaatacgtttgagagtttaaaacatcaattgtttgtcgagtatacacaaaaatta
actaataccgatcaccttttgaaagataatatttctaagctagttaccagcaaagccgtg
gcggattcgttgagtttatccatagtaaatataataaaaccaagtttggaggagtgttat
aaggaaatgatgggtacaacacttattccatcctgggaacgagtctgcggaacaatgttt
caacaaattcatgacacctttactaaaggcactaaggaatacactgcgtcagttgaaaac
tacatggataaacaaagacacgcgcaagataaaggtgctgatctaataagtcaaatgcaa
aaggtttccgataacataaaaaaaaattcagacaagctacctgccaatgtttctcaagaa
attgaaaagcaactaaacatttcttttgccaacatgcaggacagattaacactcatgttg
gcgaatttggtgagtgagcaagtgaaattgggctttaagaaccatgcggcaatactggaa
gatagcgttattaatgctgttcgatcgagagcagtaacaccatcgccgcatgtgtttgat
tctcaggcgcagttggcacacattcaacaactgttaggcaaaggacaaatcgatgtggcc
tttcagcaagctttgtcagcatccgatttatccttagtagtacatgtctgcgaaaaaacg
aatcctcaagaagttttcaaaataggaggttgcttactcacacagcctgtcattttgtcg
ttaattcaacagttaagtgcagacttagttagaaacactgaattgaaacaaaagtatatc
gaagaagccgttttaagtttggagcctactaatttaataacgaaagagcacatgcctatt
gtgctaaaagaattacaacaaaacctaaacaatttcatatcttcgcatcctaatcatagc
tgtgtaaggaatatgcgaaggttgcatttgatgacgcagtcgttactgactccctga
DBGET
integrated database retrieval system
