Photinus pyralis (common eastern firefly): 116171188
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Entry
116171188 CDS
T07438
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116171188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116171188
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116171188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
116171188
NCBI-ProteinID:
XP_031343743
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MADDAESDDQWLYGDGDVDAPPPQAEKQPEVEEKEAVAETDNSADQPEEAAPEADPPLDD
PPKDKPTENGEAVEEDKQNGEGSDKEDYDEDSDDDVNVVIGDIKTSPTYASLNIKRGGLL
TTTTKGDKTLQTPQTGKFTVEEFEHVGLINGIPASEFNLDSLEDKPWRKPGADITDYFNY
GFNEDTWRAYCERQKRMRVSESGTGLLPLNAIGMPRGPLPIMNDNSKYAGAAYAGIRKAG
PPPGRRMTGSIDVIGGATSRIGVPVSKVEAPKENVIQVMTADRREYSRKPAPFPDMSVPP
PTTFEEFHPEYDFNPEPEPFYGGYEPTQDSQWGGNSSWQPQEIKTLTPTAPPGPVMPPAP
VPPVNAPMMSNRHPPMPVPSPVKDEMALSRRSKSKEKESMRRERDRSRERDRDRERERSH
RRDRSRSRSRRHKSRSRSPSHRSHRKKKSRRHEDSD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatgccgaaagcgacgatcagtggttatacggcgacggcgacgtcgatgca
cctccgccacaagcagaaaagcaaccggaggtagaagagaaggaggctgtggccgaaaca
gacaacagtgccgatcaaccagaagaagcagcccccgaggccgatccaccgctcgatgac
cctcccaaagataaaccgacggaaaacggcgaggccgtcgaagaagacaaacaaaacggg
gaaggcagtgataaggaggactacgacgaagacagtgacgatgacgttaacgtcgtaatt
ggcgatattaaaacgagtccaacgtacgcttcgcttaacataaaaaggggcggcttactt
acgactacaacgaaaggggacaaaacattgcaaacgccccaaactggaaagtttaccgtt
gaggaattcgaacacgtggggttgatcaatggtattcctgcaagcgaatttaacttggac
agcttggaagataagccctggcggaaaccgggtgcggatattaccgattattttaattac
ggattcaacgaagacacttggagagcttattgtgagcgacaaaaacgaatgcgtgtgtcg
gagtcgggtactgggttgctgcccctgaacgctatcggaatgccacgcgggcctctaccg
attatgaatgataatagtaagtatgctggtgctgcttatgcaggaataagaaaagctgga
cctcctccaggtagaagaatgactggttcaattgacgttatcggtggtgccacaagtcgc
attggtgttcccgtttcgaaagtagaggctcccaaagaaaatgttatacaggtgatgacg
gccgatagacgagaatatagccgaaagccagccccatttccggatatgtctgtcccacca
ccgacgacgttcgaagagttccatccggaatacgacttcaatcctgaaccggaaccgttt
tacggcggctacgaacctactcaagattcccaatggggaggtaattcttcgtggcagccg
caggagataaaaactctaacaccgaccgccccacccggtccggtcatgcctcccgctccc
gttccgcccgtaaacgcacctatgatgtcgaacaggcatccgccgatgcccgtccctagc
cccgtaaaggacgagatggcattgtctagacgttcaaagtcgaaggagaaggagtcgatg
cggcgagaaagagatagatctcgggagagagatcgcgatcgagagcgtgaacgatctcat
cgtagagatagatcgagaagcagatctcgtaggcataagtcacgatcgagaagtccgagt
catcggtcacatcgtaagaagaaatctagaaggcacgaagatagtgattaa
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