Photinus pyralis (common eastern firefly): 116171361
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Entry
116171361 CDS
T07438
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03030
DNA replication
ppyr03410
Base excision repair
ppyr03420
Nucleotide excision repair
ppyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116171361
03410 Base excision repair
116171361
03420 Nucleotide excision repair
116171361
03430 Mismatch repair
116171361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppyr03032
]
116171361
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116171361
DNA replication proteins [BR:
ppyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116171361
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116171361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_22
Rad17
RuvB_N
AAA_14
AAA_30
AAA_18
PTCB-BRCT
nSTAND3
RCF1-5-like_lid
AAA_17
AAA_33
AAA_5
AAA_16
Zeta_toxin
RNA_helicase
BRCT_2
NTPase_1
AAA_6
AAA_28
Motif
Other DBs
NCBI-GeneID:
116171361
NCBI-ProteinID:
XP_031344013
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MSQDIRSFFKALPSNKSNSTTSSTTVSKNKRPVITESSDEDIVPVTPKPVKVSKTTKKRK
LQQLSSESDSEKNVSTKKKNSPQSKSTKNKLKSVDISTTFSSTPIKQTPVIERPVQEKPP
EEKKTVKRKKKDKANSKTSTEVGIHNDKNFEQSLLDLDDDFFTDLDELDKTANEILKNSV
TETPQDNKTQEKPIEKPSEPTPKRQKSEEEHHDGDPDQERHERKRQSYALYQKYLNRSGP
AHHGSKELPKGTPTCLSGLCFLRTGVLDSLENEEFETLIKDHGGRVVHGVSKKVSYIVVG
EDPGPAKLEKAKTYGIKQLSEDELLDLIRTKSGQKPSSNDNTNLEQISAESAELIHNNKK
TTTKEDTESSNTSQKLVNGKHNATPSRNKSKDVEPMPKPEKKSETTKKPNIIVIKPEPKP
AQIHEIPNDSVPWTEKYKPRSIKSIIGQQTEKSNMNRLIHWLQNWYKNHGSKNKPKLIKP
SPWAKSDDGAYFKAALLSGPPGIGKTTTATLVAKELGFDVVEFNASDTRNKRLLHEEVSQ
LLSTKSLAGYFTSGSAPTSKHVLLMDEVDGMAGNEDRGGVQELISLIKNSNIPVICMCND
RNHPKIRSLSNYCFDLRFSRPRMEQIKGAMMSVCFKEGVKISSDALSEIITSSGMDVRQI
LTHLSLWSADKSTDSDIKAPKKDSPLGPWEVCRLVFSAENHKTNTIVDREKLFYYDYSIA
PLFVQENYLKVLPHAPKSEHLQRFSAAADCISMGDLVDTGIRRTNNWSLLNMEAMCLSVL
PGSYLSGHVNAQIDFPSWLGKNSKRNKFVRLLGELQAHMRTSISANRTEVNLDYLSTLRM
SLVNPLIKKGGEGVPDSLNVMHNYNLLREDLDSILELAQWPKQKDPMNMVDSKVKAAFTR
AYNKSSAMLPYAVQTAVSKKRGATSNEEEYGLGEEEEEEEVEDDKDINQDAMIKAKKTTA
KAKKKDEPSTSGAKGAAKTSKASTAKKAKK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacataagatcatttttcaaagcgctaccatcaaacaaatccaattccacc
acttctagtaccaccgttagtaaaaataaacgtcctgtaataactgaatcaagtgacgaa
gatattgtacccgttaccccaaaaccagttaaagtatcaaaaactaccaagaaacggaaa
ctacaacaactgagctcagaatctgatagtgaaaagaatgtctccacaaaaaagaaaaat
agcccccaatcgaagagcacaaaaaacaaactgaaatctgtcgatatttctactacattc
agcagtacccctattaaacagacacctgtgattgaaagacctgtgcaggagaaaccgcca
gaggaaaagaagactgtaaagcgtaagaaaaaagataaagcgaacagcaaaactagcact
gaagttggcatacataatgacaaaaatttcgaacagtccttgttagatttggatgacgat
ttctttaccgatctggatgaattggataaaaccgccaatgagatcttgaaaaatagtgtc
accgaaacacctcaagataataaaacccaagaaaagccgatagaaaaacctagtgaacca
acacccaagcgccagaaaagtgaggaggaacatcacgacggcgatccagatcaagaaaga
cacgaaagaaagagacagtcgtatgctttgtatcagaagtatctcaatcgctcaggaccg
gcccatcatggaagcaaagagttgcctaagggaacaccaacttgcctcagcggtctctgc
tttctccgaacaggtgttttagattctctagagaatgaagagtttgagactttgattaaa
gatcatggtggcagagtggtgcacggggtttcgaagaaagtgagttacattgtggttggt
gaggatcctggaccagcaaaactggagaaggctaaaacttacggaattaaacaattgtct
gaagatgaattacttgacttaattagaacaaaatccggtcaaaaaccttcttcgaatgac
aatacgaatttagagcaaatttctgcggaaagtgcagaacttattcataacaacaaaaaa
acaacaacaaaggaagatacagaatcctcaaacacatcacagaagttagtgaatggtaag
cacaacgcaacaccatctaggaacaagagtaaagatgtagaacccatgcccaaacctgaa
aagaaatcagaaactaccaaaaaacctaatattattgtaataaaaccagaacctaaacct
gcacaaatccatgaaatcccaaatgatagtgtaccatggactgaaaaatataaaccgagg
tccataaagtctattattggccaacaaactgagaaaagcaacatgaatcgcttaattcac
tggttacaaaattggtacaaaaatcatggaagtaaaaacaaaccgaagcttataaagcca
agtccttgggctaaaagtgacgatggtgcttacttcaaagcagcacttttgagcggcccg
cccggaattggaaaaacaacaaccgccacattagtagcgaaagaattgggattcgatgtg
gtggagtttaatgcgtcagatacgcgtaataaacggctactccatgaagaggtttcccaa
ctgttgagcaccaaatcattagcgggatactttacaagtgggtcggccccgacaagcaaa
catgtacttctaatggatgaagtggatggcatggctgggaatgaagatcgaggtggagta
caggagttaatctccctgattaagaattccaacattcctgtgatctgtatgtgtaatgac
agaaatcatccgaaaatacgatctttaagtaattactgttttgatttacgattctccagg
ccacgaatggaacaaataaagggagcaatgatgagtgtttgttttaaagaaggagtcaaa
atcagctcagatgcgctctctgaaataatcacatcctccggaatggatgtacgtcaaata
ctaacccatttgtcattatggagcgcggacaagagtacagactcagatattaaagcacct
aaaaaggattcgcccttaggcccatgggaagtttgtcgactggtcttctcagcggaaaat
cataaaacgaacacaattgtcgatcgagaaaaactattttattacgattacagtatagct
cctttatttgtccaagagaactatttaaaagtattaccgcacgcaccaaaaagtgaacat
ctgcaacggttttcggctgctgccgattgtatcagtatgggagatttagttgacacagga
ataagaagaaccaacaattggtccctgttaaacatggaggcgatgtgcttatctgtgctt
ccaggttcctatcttagcggacacgttaatgcccaaattgattttcctagttggctgggt
aaaaattcgaaacggaataaatttgtgcgtttactcggagaattacaggcccatatgcga
acaagtatatcagctaatcgaactgaagtgaatttggattacctttcgacactacgcatg
agtcttgtgaatcctttaattaaaaaagggggcgagggcgttcccgactcgctcaatgtt
atgcacaattacaatctgttacgagaagatttagacagtattcttgaattagcgcagtgg
cctaaacaaaaggatcccatgaatatggtggattcaaaggtaaaggcagctttcacacgt
gcgtacaacaaatccagtgccatgctaccatacgctgtgcaaacagccgtatcaaaaaag
agaggcgctaccagtaacgaagaggaatacggtcttggtgaagaagaagaagaggaggag
gttgaagacgataaggatattaatcaagatgcgatgattaaggcgaagaagacaactgct
aaagctaaaaagaaagatgaaccatcgactagcggtgctaagggggcggcaaaaacttcg
aaagcaagtacagcaaagaaagcgaagaaatga
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