KEGG   Photinus pyralis (common eastern firefly): 116171446
Entry
116171446         CDS       T07438                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ppyr  Photinus pyralis (common eastern firefly)
Pathway
ppyr03030  DNA replication
ppyr03410  Base excision repair
ppyr03420  Nucleotide excision repair
ppyr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116171446
   03410 Base excision repair
    116171446
   03420 Nucleotide excision repair
    116171446
   03430 Mismatch repair
    116171446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppyr03032]
    116171446
   03036 Chromosome and associated proteins [BR:ppyr03036]
    116171446
   03400 DNA repair and recombination proteins [BR:ppyr03400]
    116171446
DNA replication proteins [BR:ppyr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116171446
  DNA Replication Termination Factors
   ELG1-RFC complex
    116171446
Chromosome and associated proteins [BR:ppyr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116171446
DNA repair and recombination proteins [BR:ppyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116171446
  Check point factors
   HRAD17(Rad24)-RFC complex
    116171446
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Mg_chelatase AAA_16 AAA_22 AAA_30 AAA_11 DUF815 Rad17 AAA_assoc_2 AAA_24 bpMoxR Gp44_lid AAA_19 ResIII RuvB_N SLFN-g3_helicase DNAX_ATPase_lid AAA_5 nSTAND3 AAA_7 Sec66
Other DBs
NCBI-GeneID: 116171446
NCBI-ProteinID: XP_031344161
LinkDB
Position
Unknown
AA seq 359 aa
MESFLKSGKLGSSTTKVDKSSHANNETSKKKRSVPWIEKYRPRTVSDIVEQNEAVQVLEQ
CIAGADLPNLLFYGPPGTGKTSTVLAAARQLFGDMYKDRILELNASDERGIQVIRDKVKT
FAQLTASAVRHDGKPCPPFKIIILDEADSLTNAAQAALRRTMEKESKTTRFCLICNYVSR
IIEPLTSRCTKFQFKPLDESKILERLQHIAKEESLQIDSDVLNALVKTSGGDMRRATTSL
QSCSTLKGKDTTISMQDVYEITGVVPEQWIKNYLQACKSNDYSKLEVFIETFILEAYTAS
QILKQMNEFIVNTDEFNDKQKAIIGEKLGTVSYRLQDGGSEYIQLLDLGCAIMIEYSKT
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggagtcatttctcaagtctggaaagttgggcagtagtacaacaaaagtagataagagt
agtcatgcaaataatgaaacttcaaagaaaaaaagatcagttccttggatcgagaaatat
cggccacgaacagtttcggatatagttgaacaaaatgaggccgtgcaagttttagaacag
tgcattgcaggagccgatctgcctaatttactcttttatggacctccaggtacaggtaaa
acaagcactgttttggcagccgcacggcagctgtttggagacatgtataaagatcgtata
ctagagctgaatgcatctgatgaacgtggcattcaagtaattcgtgataaagtgaaaacg
tttgcacaattaactgctagtgcagttcgtcatgatggaaaaccttgccctccgttcaaa
ataatcatactagatgaggctgactccttaacaaacgcagcacaggctgctctcagaagg
acaatggaaaaagaatctaaaactacacgattttgtttaatatgtaattatgtgtcaaga
atcattgaacctttaacttcgaggtgtacgaaatttcagtttaaaccgctggatgagtcc
aagatacttgaaagattgcaacacattgccaaagaggaaagtttgcaaatagattctgat
gttctaaatgctctagtgaaaactagcggcggagatatgaggcgtgcaaccacatctctt
caaagttgttccacattaaaagggaaagacacaaccatcagtatgcaggatgtctatgag
attactggagtggttcccgaacaatggatcaaaaattatttgcaggcatgtaaatcaaac
gattattcaaaattagaggtttttattgaaacatttattttggaagcatatactgcttca
cagattttgaaacagatgaatgaattcattgtaaatacagatgaatttaatgataagcag
aaagcgataattggtgaaaagttagggactgtgagttatcgtttacaggatggtggttcc
gaatacatccaattgcttgatttgggatgtgccattatgatcgaatattctaaaacttga

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