Photinus pyralis (common eastern firefly): 116172428
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Entry
116172428 CDS
T07438
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
Organism
ppyr
Photinus pyralis (common eastern firefly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
OLF
Motif
Other DBs
NCBI-GeneID:
116172428
NCBI-ProteinID:
XP_031345504
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MKVTQSVKSTRSSISFAAITFSLEILIGFLIYKSLKSEIEIKLMNGVREEIYKKELERVL
TEKDNWTEMYETTEINDRPKSRNRRFISFKLRNNRKHSAPVTTCPEKPGPPGPPGPPGVP
GLPGPAVNSDDIPSGPPGPPGLPGEPGPTGPPGPPGLPGYMGLAATDNQMYNLPGHPGEP
GQPGRPGEPGPPGPPGLPGDTGSGVNNEYKFRGIPGEPGPPGQPGEPGQPGQLGAPGQPG
EPGRAGERGAPGPQGPPGPPDSSGKRHNIPGPPGQPGRPGDPGEPGRPGDPGAQGSPGEP
GPPGSPGVAEDYSDTYHIPGPPGQPGQPGRPGEPGPPGSPGRSENPTQDQLNCGEPGTPG
PPGPPGPPGPPGHNGEPGGLQQITGPPGPQGQPGPPGPPGLAQRTGHTLSYGQPGPPGPP
GQQGSPGFVGQPGSPGERGAPGEKGKDGLPGRLGDKGTPGLPGKDGSTGPPGPKGEPGNA
KQITGPPGPPGQQGKPGFAGQPGAPGLPGLRGNPGEKGAVGLSGPSGSPGRIGAPGERGA
PGRKGEDGTPGKPGDKGIPGPQGKEGLPGQKGEPGNTQQIIGQPGRPGQPGPPGLPGLTH
GSGNIKHLYGQLGPPGRAGPPGPPGTPGSIGHTGPTGSPGPRGNPGEKGSPGSPGLPGRD
GLVGPPGAVGRRGEDGLRGPPGDKGSPGARGKDGLPGPPGEKGERGHAAVKGAPGPPGPP
GEPGRTIVSGNTKSMYGQPGPPGTPGQQGLPGPRGNPGEKGAVGRPGPHGNDGDSGPPGA
RGAPGGKGEVGLPGTPGTPGKDGPPGEKGERGHAQQINGAPGPPGPPGHPGPPGQALLSG
NIKPMYGQPGPPGQPGQPGQQGPKGNPGEKGAVGPPGVHGQKGDSGPPGERGVPGGKGEN
GSPGKPGIPGKDGPPGEKGERGHAQQINGAPGPPGPPGHPGPPGQALLSGNIKPMYGQPG
PPGQPGHPGQQGPKGNPGEKGAVGPPGVHGQKGDSGLPGERGVPGGKGENGLAGKPGDKG
SPGQRGEVGSPGSQGPKGEPAHAHVVKGAQGTPGPPAPPGPPGPPGPPGQQGVRGAPGVK
GDDGLPGKSGKDGPPGRQGDKGEPGRAQQINGAPGPPGPPGPPGRTEGSGNIKPIYGQPG
PPGKPGPPGQQGPKGNPGEHGVVGPPGPPASPGSKGDAGPPGKDGLPGQKGDKGNPGSPG
PPGTPEAPGQTAKTAYGIKGDKGDPGPMGPIGSPGVAGKPGETGARGLPGEPGREGSPGL
RGAQGVTAKVTNSSTAVTAKPKHSHSHGTCDMKSMRSPIIAGKRCRTGAKFRLSGSACKM
YGVGGRRSVGTANVTYTSFMVDPKEKVNHSSCTFWATTGDNMKLWEFKDSIALSSNLPSR
IYNLAIPFDGNSHVVYDGYFFYKMSGQVPKIIKYNLESGKSTSVLIPGFARCKMQPLYLS
GINYIDLSVDQNGLWAIFSHMREESTEIAKINHLDMSVIYTWEIGISNKHYIDMFIASGT
VYTVDYSPTFEIQISWAINLILSNVTKVNIMGIEQTGDITSITYDHKYQELLIVDGKERM
IYPFYCQDKKGGSLYRPRIR
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttactcaatcagttaaatcaacacggtcctcaatttcttttgctgccataacc
ttttcgttagaaatcttaataggttttctaatctacaaaagtcttaaaagtgaaattgaa
atcaagctcatgaatggggtacgtgaagaaatttacaaaaaggaactggagcgagtactt
accgaaaaagataactggacagaaatgtatgagactactgaaattaatgatcgccccaaa
agcagaaaccgaagatttatatccttcaaattaagaaacaatcgcaaacattcggccccg
gtgactacctgtcctgagaaacctggaccacctggaccgccgggtccacctggagtacct
ggattgccaggacccgccgtaaatagtgatgacataccttctgggccccccgggccgcct
ggtttacctggtgagcctgggccaaccggaccacctggaccaccaggattacctggatac
atgggacttgcggcaactgataatcaaatgtataaccttcctgggcatcccggagaacca
ggacaaccgggtcgccccggcgaacctgggccacccggtccacctggattacctggagac
actggatcaggcgtaaataacgagtacaaatttcgtgggattccaggagaaccgggacct
cctggacaacctggagaaccgggacaacctggacaacttggcgcaccaggacaacctggt
gagcctggccgggcgggcgaacgtggagcgcctggtccacaaggaccaccagggccccct
gattcttcaggaaaacgtcataacattccaggacctcctggccaacctggacgacctggt
gatccaggagaacctgggcgacctggtgatccgggagcacaaggaagtcccggtgaacct
ggcccacctggatctcctggagttgctgaagactattctgacacataccacattcctgga
cctcccggacagccaggacaacctggacggcctggtgaacctggaccacctggatctcca
gggcgatctgaaaaccccacacaagatcaacttaattgcggagagcccggaacaccaggt
ccacctgggccgcctggtccgccaggaccaccaggacataacggggaacctggaggtttg
cagcaaattactggaccacctggtcctcagggacagccagggccaccaggaccaccagga
ctcgcacaaagaaccggacatactttaagttatgggcagccaggaccacctggaccaccc
gggcagcaaggaagcccaggtttcgtagggcaaccaggatcaccgggtgaacgtggcgcc
cctggagaaaaaggcaaagatggattaccgggaaggctaggagataaaggcactccaggt
ttaccagggaaggacggttcaactggaccaccaggacctaaaggtgaaccggggaatgcc
aaacaaattactggaccacctggccctccaggacagcaaggaaaacctggtttcgcaggt
cagccaggagcaccggggttaccagggctgagaggaaatcctggcgagaaaggcgcagta
ggcctttctggaccatcaggttcgccaggtcgtattggtgcaccaggtgaacgaggggct
cccggtagaaaaggtgaagatggaacaccaggcaagcctggagacaagggcattccaggg
ccacaagggaaggagggtctaccaggtcagaaaggggaacctgggaatacacaacaaatt
attggacagccgggtcgtcctggacaacccgggccaccaggactaccaggacttacacac
ggatccggaaatataaaacacctctatggacagcttgggccacctggccgggcggggcca
cctggaccacccggaacacctggttccataggccacacgggaccaacggggtctccaggc
ccgagagggaatccgggagagaagggttctcctggatcgcctggtttgccaggtcgtgat
gggcttgttggtccaccaggtgctgtcggaagaagaggtgaagatggattacggggacca
ccaggagataagggctctccaggcgcgcgaggtaaggacggtcttcctgggccacccgga
gaaaaaggagaacgtgggcatgcagcagtcaagggagcgccgggtccccccggacccccc
ggggaaccaggacggacaatcgtatccggtaatactaaatcaatgtacggacaacctgga
ccccctggaactccgggacagcaagggttaccaggtccaagagggaatccgggtgaaaag
ggtgcggtaggtcgccctggtccacatggtaatgacggagattccggtccgccaggtgca
cgaggtgccccaggcggaaaaggagaagttggattaccgggaacaccaggcacaccaggg
aaagatggtccaccaggagaaaaaggagaacggggtcatgcacaacaaattaatggagca
ccaggtcctccaggaccacccgggcacccaggaccaccaggacaagcacttttatctgga
aatattaaaccaatgtatggacaacctggcccacctggacagccaggacaacctggacag
caaggaccaaaagggaatccaggcgagaaaggtgcggtaggcccccctggtgtgcatggt
caaaagggagattctggtccaccaggtgaacgaggcgttcccggaggaaaaggggaaaat
ggatcaccgggaaaaccaggcataccagggaaagatggtccaccaggagaaaaaggagaa
cggggtcatgcacaacaaattaatggagcaccaggtcctccaggaccacccgggcaccca
ggaccaccaggacaagcacttttatctggaaatattaaaccaatgtatggacaacctggc
ccacctggacagccaggacatcctggacagcaaggaccaaaagggaatccaggcgagaaa
ggtgcggtaggcccccctggtgtgcatggtcaaaagggagattctggtctaccaggtgaa
cgaggcgttcccggtgggaaaggggaaaatgggttagcgggaaaaccaggagataagggc
tctccaggccaacgaggagaggtcggttcacccggatcacaaggaccgaaaggagaacct
gcccatgcacatgtagttaaaggagcacagggtactcctggaccacccgcaccgccaggt
ccacctggaccgccagggccgcctggccagcaaggtgtgcgcggcgcccccggcgttaaa
ggtgatgatggattaccaggaaaatcaggaaaggacggtccacctggtcgtcaaggagat
aaaggagaacctgggcgcgcacagcaaattaatggggcgccgggtcctcctggaccaccc
gggccaccaggtcggacggagggatccggaaatattaaaccaatttatggacaacctggc
ccacctggaaaaccaggaccacctgggcagcaaggccccaaagggaatcccggcgagcac
ggagtggtgggtccccctggtccgccagcttcaccgggtagtaaaggagacgccggtcca
ccagggaaagacggattacctggacaaaaaggtgataaaggaaatccaggaagcccagga
ccccctggcactccggaagctccagggcaaacagccaaaaccgcttatggcataaaaggt
gataaaggggatcctggaccaatgggcccaataggaagcccgggtgtagcaggaaaaccg
ggagaaacaggtgcacgaggattgcctggagaacctggacgggaaggttcccctggatta
cgtggtgcacaaggtgtaaccgctaaagtgacgaattcttcaactgctgtaaccgctaaa
ccgaagcactcacattcgcatggtacttgtgatatgaaaagtatgcggtccccaatcatt
gcaggtaaacgatgtcggacaggagcaaaattcagactaagtggttcagcttgcaaaatg
tatggagttggaggaagacgctctgttggcactgccaatgtaacttacacctccttcatg
gtcgaccccaaagaaaaggtgaatcatagctcttgtacattttgggcaactactggtgac
aatatgaaactttgggaatttaaagattcgattgcgttgagctctaatcttccgtccaga
atatacaatctcgctattccgtttgacggaaattcacatgtggtgtacgatgggtacttc
ttttacaaaatgagtggacaagtgcccaagataattaaatataacttggaaagtggaaaa
tcaacttccgttttaatacctggatttgcaagatgtaaaatgcaacctttgtaccttagt
ggtattaactatattgatctcagcgtcgaccaaaatggcctgtgggctattttctctcac
atgcgcgaagagtcgacagagattgcgaagataaatcacttggatatgagcgtaatttac
acgtgggaaattggtataagtaataagcactatatcgatatgttcattgcatctggaact
gtctatactgtggattattcaccaacttttgagatacaaataagttgggcaatcaacttg
atacttagcaatgttacgaaagtcaatatcatgggaattgaacagactggagatatcact
tccatcacctacgatcataagtatcaggagcttttaattgtcgatggcaaggagagaatg
atttatccgttttattgccaggacaaaaaaggtggttccctttaccgtccacgtatacgg
tag
DBGET
integrated database retrieval system
