Photinus pyralis (common eastern firefly): 116172737
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Entry
116172737 CDS
T07438
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03015
mRNA surveillance pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116172737
09122 Translation
03013 Nucleocytoplasmic transport
116172737
03015 mRNA surveillance pathway
116172737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116172737
03041 Spliceosome [BR:
ppyr03041
]
116172737
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116172737
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116172737
Spliceosome [BR:
ppyr03041
]
Complex C
Other components
EJC/TREX
116172737
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116172737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
MoaE
Motif
Other DBs
NCBI-GeneID:
116172737
NCBI-ProteinID:
XP_031345864
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADADDLLDYEDEENPEQNSAETPAATEQKKGVKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPTIKVGVFFGGLPIQKDEELLKSNCPHIVVGTPGRILALVRS
KKLNLKHIKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKDIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMA
LAQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSEESDAKILNEVQDRFDVNITELPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgctgacgatcttttggattacgaagacgaggaaaatccagaacaaaactcc
gccgaaacaccggcagcgactgaacagaaaaagggcgtaaagggtacctacgtctcaatt
cacagctccggttttcgcgattttctgttaaaaccggaaatattgcgcgccattgttgat
tgcggctttgagcatccttccgaagtgcaacacgaatgcattcctcaagcagtattaggc
atggatattctatgccaagcgaagtccggtatgggaaagactgcagtatttgtattagca
acgttacaacagctagaacccactgaaaacgttgtgtacgttctcgtcatgtgtcatact
cgcgaactggcctttcaaatcagtaaagaatacgaacggtttagtaaatatatgcccaca
attaaagttggcgttttctttggtggtctgcccattcagaaagatgaagaactattgaaa
agtaactgcccgcatattgttgttgggactcctggtcgaattttggctttggtccggtcg
aaaaaacttaacttgaagcatataaaacattttattttggacgaatgcgataaaatgtta
gaattgctagatatgaggcgagacgttcaagaaatatatcgcaacacacctcatggcaaa
caagtaatgatgttcagcgccaccctcagtaaagacattcggccggtttgcaagaaattc
atgcaagatccaatggaagtttatgttgatgacgaagctaaactaacattgcacggattg
caacagcattatgttaagttgaaagaaaacgaaaaaaataaaaaactatttgaattgctt
gacgtgctcgagttcaaccaggtggttatttttgttaaatctgttcagcgctgcatggct
ctagctcaacttttgacagaacagaatttccccgcgattgggattcaccgaggtatgacg
caggaagagcgtttgtctcgttaccaacagtttaaagatttccaaaagcgtatcttggtg
gcgacaaatttgtttgggcgtggtatggacatagagagagtgaatattgtatttaattac
gatatgccagaagattccgacacatatcttcatagagtcgctcgcgcagggcgatttggt
accaaaggtttggctatcacgtttgtgtctgaggaaagcgatgcaaagatcctaaatgaa
gttcaggatcgattcgacgtaaatattaccgagttaccggatgaaatagatttaagttct
tacattgaaggacgataa
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