Photinus pyralis (common eastern firefly): 116173011
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Entry
116173011 CDS
T07438
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03030
DNA replication
ppyr03420
Nucleotide excision repair
ppyr03430
Mismatch repair
ppyr03440
Homologous recombination
ppyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116173011
03420 Nucleotide excision repair
116173011
03430 Mismatch repair
116173011
03440 Homologous recombination
116173011
03460 Fanconi anemia pathway
116173011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyr03000
]
116173011
03032 DNA replication proteins [BR:
ppyr03032
]
116173011
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116173011
Transcription factors [BR:
ppyr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116173011
DNA replication proteins [BR:
ppyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116173011
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116173011
MMR (mismatch excision repair)
116173011
DSBR (double strand breaks repair)
HR (homologous recombination)
116173011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
T2SSC
Motif
Other DBs
NCBI-GeneID:
116173011
NCBI-ProteinID:
XP_031346158
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MADKYQLSEGSLRVIMSGGKVEDAIMQVLGTKRIASGSSSDKERYRLLLSDGKYLISFAM
LTTQNNDKIVNGELSDNSIIKIKKYITSVINNVGKVNKRVLVILEMETLVPGHKSSKIGS
PEQLPEDDSEPLPSETKNNTVSSSTSSTVPQVNGSHRNDTDVNMSMQDQLTHPISSLSPY
QNKWVIKARVSNKSSIRTWSNSRGEGKLFNMDLIDESGEIRATAFRDLVDKFYDLIEVDK
VYYISKCQLKIANKQFSNLNNDYEMTFTPDTIVQECHDVVDSIPQTRYDFISIDKIAHIE
VDTMIDVIGVCKSASDVQMFQARSTGRDLKKRELTLVDQSNNSIALTLWGTEAETFDSAS
QPVIVIKGARVSQFGGGKTLSTNASTVMKINPDIPEAHRLRGWFDNEGISKTTVNISARS
EGGGSQTQWINVKDVQEMGMGQGDKGDYFQVVGTILLYRSENGIYKACPKEDCKKKAADQ
GNGMYRCDKCNREYPNFKYLLLGSANIADWSGNIWLSLFSSEAEKVLGMSSQAVGEAIEN
DSQALVEIADKAHFKEFIFKCRSKMENYNDENRLKTVALRVEPVNFKEYNSYLISQINQL
LN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaataccaattaagtgaaggcagcttacgagtgattatgagtgggggcaaa
gttgaagatgctataatgcaagtgttaggcactaagcgaattgcatctggtagctcctcc
gataaagaaaggtaccgtctacttctatcagatggcaaatacctcatttctttcgcaatg
ttaactacacaaaacaatgataagattgttaatggtgaactctccgacaattccataata
aaaatcaaaaagtacatcaccagcgttattaacaatgtgggaaaagtgaacaaacgtgtt
ttagttatattagaaatggagaccctagttcctggccataagtcgagtaaaattggttct
ccagaacaattgccggaggatgatagcgaaccacttcccagtgagactaaaaataacact
gtcagttcgagtacgtcatctactgtgccacaagttaatggttctcacagaaacgacact
gacgtaaacatgtccatgcaagaccagctaacgcatcccatttcaagcttgagcccctat
cagaataagtgggtgatcaaggcacgtgtcagtaacaaatcctcaattcgcacatggtca
aattccagaggggagggtaaattattcaatatggatttaatagacgagagcggtgaaatt
cgagcaacagcatttcgcgatcttgtggataaattttacgacttaatcgaggtggacaaa
gtgtattacataagcaaatgtcaactgaaaatcgccaataagcaatttagtaatctcaat
aacgactacgagatgacatttacccccgacacaatcgtgcaggagtgccatgatgtggtg
gattctatacctcaaaccagatacgacttcatctcgattgataaaattgcacacattgaa
gtggatacaatgatagatgttatcggagtatgcaaaagcgcgtccgacgtccaaatgttt
caagcgagatctacagggagggacttaaaaaaacgcgaactcactttggtggatcaaagc
aacaattccatcgccctaaccctttggggtacagaggcggaaacgttcgacagcgcctcc
caaccggtaatagtcattaaaggcgcgagagtgtctcagttcggtggcggaaaaacgctc
tccacgaatgcctctacagtcatgaaaattaatccggacattccggaagcgcatcgtctc
cgaggctggttcgacaatgaaggtatatccaagactacggtcaatattagcgccaggtcg
gagggcggcgggtcacaaactcaatggattaacgttaaggacgttcaggaaatgggcatg
ggacagggtgacaagggcgattatttccaagttgtgggcaccatacttctgtaccgttcc
gaaaacggaatatacaaggcctgtccaaaagaagattgcaagaagaaggcagccgatcaa
gggaatggaatgtaccgatgcgacaaatgtaatcgagagtaccccaactttaagtatctg
ttactgggatcagccaatattgccgattggagtggaaatatctggctcagtttgttttct
tcggaagcagagaaagtgttgggcatgagttctcaggctgttggtgaagcaattgagaat
gactcgcaggcgttagttgagattgcggacaaggcgcactttaaggagtttatctttaag
tgtcgctctaagatggaaaattacaatgatgaaaatcgtctgaagactgtggctcttaga
gtggaaccggtgaatttcaaagagtacaactcttatctaatctcacaaataaaccagtta
ctgaattaa
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integrated database retrieval system
