Photinus pyralis (common eastern firefly): 116173083
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Entry
116173083 CDS
T07438
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116173083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116173083
03036 Chromosome and associated proteins [BR:
ppyr03036
]
116173083
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116173083
Coactivators
SAGA/TFTC/STAGA complex
116173083
Chromosome and associated proteins [BR:
ppyr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116173083
STAGA complex
116173083
TFTC complex
116173083
SAGA complex
116173083
SLIK complex
116173083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
WDR54
Beta-prop_RIG_1st
PROPPIN
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
116173083
NCBI-ProteinID:
XP_031346226
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MGTNVNPDKNQLLAVLQVLRKYNLKGTEELLKKEANIAINLEQEKVESDVNSVLTGYKSD
GDPETYEASYVELKHFVENSLDIYKHELGMILYPVLVHMYLELVYNGHTEKAIDLMQKFG
PDQDLYYQDDLKKLALVTKRDHMNGNELTDTFKSNQFIIRMSRDTLSLLKRHLHDKKESV
LLNIIQEHLYFDMYEGVARNKAQIDATAGAVVGEATRLDNKAKVYYGIPKAPDIQTLAAP
VEDEEEGGEQETPDKPKKKKAKKDPLFSKKTKSDPNAPPPDRIPIPDLKDNDKVEKVKSF
RESCRRITLGPETMPSVCSYTLLNANYTVTCAEITEDSSILAVGFSDSIVKVWTLVPQKL
KAMKSAEQLQDVNTDAEDVLARMMDERSGESSRSLVGHGGTIYSVSFSPDRTLLLSCSED
STVRLWSLQIWTCLVVYKGHMFPVWDVKFSPLGYYFATASHDRTARLWATDHYQPLRVFA
GHFSDVDCIQFHPNSNYVATGSSDRRVCLWDCVTGNHVRIMTGHKSPIYVLAFSICGRFL
ASAGADCNVLIWDLAHGHLVAEFQGHEKTIHTLTFSRCGNLLASGSLDHTLKLWDFNKLS
EDTNSEDVNISHNPEVKMGDLYMLRSFATKSSPIIALHFTRRNLLLAVSMYDGITT
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaaacgtaaacccggataaaaatcagcttttagctgttttacaagttttacga
aaatataacctaaaaggtacggaagagttgttaaagaaagaagcgaacattgcaatcaat
ttagaacaagagaaagtagaatcagatgttaacagtgttctaactgggtacaaaagtgat
ggtgatccggaaacgtacgaagcgtcatatgttgagctaaagcacttcgttgaaaattct
ttggatatttacaagcacgagttagggatgattttgtatcctgttttggttcatatgtat
cttgagctagtttataacggtcacactgaaaaagccattgatttgatgcaaaaatttggc
ccagatcaagacttatactatcaagatgatttaaaaaaattggccctggtcacaaaaaga
gaccatatgaacggaaatgaacttaccgacacctttaaatcaaatcaatttatcatacgc
atgtctcgtgatacgttatccctactcaaacggcacctgcatgacaaaaaggaatcagta
ctcttaaatattattcaggaacacttgtacttcgatatgtatgagggagtagcacgaaat
aaggcccagatcgacgcgactgctggtgcagttgtaggggaagcaactcgcttagataat
aaagccaaagtgtattacggcattcccaaagcacctgatatacagacattggcagcacct
gttgaggatgaagaagaaggcggcgaacaagagacccccgacaaaccgaagaagaagaaa
gcaaagaaagatcctttattttcaaagaagaccaagtcggatcccaatgccccacctcct
gatcgtattcccattccggatttgaaagacaatgacaaggttgaaaaggtgaagtcgttt
cgtgaatcgtgcaggcgaattactttagggccagagacaatgccttctgtgtgctcgtac
acattactgaatgcaaattatacggtgacctgtgcagaaattactgaagattcaagcata
ttggcagtcgggttcagtgattcaattgttaaggtatggacattggtaccgcaaaaattg
aaagctatgaaatccgctgaacagctgcaggatgttaacacggatgccgaagacgttttg
gctcgaatgatggacgagcgatccggcgagagttcgcgatctttggttggacacggaggt
acaatctactctgtgtcattctcacctgacaggacgttattgctgagttgctcagaagac
agcacagttcgtttgtggagtctacaaatttggacttgcctggttgtgtataagggccat
atgtttccagtttgggatgttaaattttcaccattggggtactactttgcaactgcgtca
catgatcgcacagcacgtctttgggcaacagatcattatcagcctttacgtgttttcgca
ggacatttttcagatgttgattgtatacaatttcatccaaattcgaattatgtggcgaca
ggatcgagcgaccgccgggtctgtttatgggattgtgtaactggaaatcatgtacgaatc
atgactggtcacaaatcgccaatctacgttttggccttcagtatttgcggacgtttctta
gcatctgctggagccgattgtaacgtactaatttgggatttagctcacggacacttggtc
gcagaatttcaaggacacgaaaagaccatccacacgttgacatttagtagatgcggtaat
ttgttagcctccggctccttggatcacaccttgaaattgtgggactttaataaactatct
gaagacaccaattcggaagatgttaacatatcgcataatccagaagtaaaaatgggcgat
ttgtatatgttacggagtttcgctacaaaatcatcccctattattgctttacatttcact
aggcgtaacttattgttagccgtcagcatgtacgatggaattactacttaa
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integrated database retrieval system
