Photinus pyralis (common eastern firefly): 116173174
Help
Entry
116173174 CDS
T07438
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116173174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116173174
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116173174
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116173174
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116173174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
zf-CCHC_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
116173174
NCBI-ProteinID:
XP_031346351
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MEYIIANVDGIKFDIEIALDEQYGALPLPFHGMDKSITAVCQFYTSPTGCLKGPLCPFRH
VRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYIAGFCTDGPSCKYMHPRFELPVPPDQNI
KDQKKPPVIICHFCGEHGHKALHCNKITSDNKELANKDNFKVPTVANAESNESSGPPTLY
HRMIPKKLEDVTCYKCGTKGHYANRCPKGHLAFLSQTKGLGEIEKKDDDNV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaatatatcattgcaaacgtggacggcattaaatttgatatagaaatagctttagac
gaacaatatggagcgttgcctttaccatttcatggaatggacaaatctattactgcagtt
tgtcaattttatacttcaccaacgggttgtctcaagggccctctgtgtccatttaggcac
gttcgtggtgatcgtactatcgtatgtaaacattggcttcgtggattatgcaaaaaagga
gatcaatgtgaattcttacacgaatacgatatgaccaaaatgccggagtgttacttttac
tcgaggttcaatgcgtgtcacaacaaagaatgtccatttttacacatcgatcccgagagt
aaaattaaggattgcccatggtacgatcgtgggttctgtaggcacggtcctcattgtcgg
cacagacacgtcagaagagtgttgtgtacaaattatatagccggattctgtacggacgga
cccagctgcaaatacatgcatccccgttttgagttgcctgtcccacccgatcaaaatatc
aaggaccagaagaagccgccagtaataatttgtcatttttgtggcgaacacggacataaa
gcgttacactgcaacaaaatcacttccgataataaggaactggctaataaggacaatttc
aaagttccaactgttgctaatgcggaaagtaacgaaagtagcggccctccaactctttac
catagaatgataccgaaaaaattagaagatgttacttgttacaaatgtggaactaaagga
cactacgcgaatagatgtcctaaaggacatttagcattcttgtcacaaacaaaaggttta
ggagaaattgagaagaaggacgatgataatgtataa
DBGET
integrated database retrieval system
