Photinus pyralis (common eastern firefly): 116173185
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Entry
116173185 CDS
T07438
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116173185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116173185
03009 Ribosome biogenesis [BR:
ppyr03009
]
116173185
03036 Chromosome and associated proteins [BR:
ppyr03036
]
116173185
Enzymes [BR:
ppyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
116173185
Messenger RNA biogenesis [BR:
ppyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
116173185
Ribosome biogenesis [BR:
ppyr03009
]
Eukaryotic type
90S particles
RNase
116173185
Prokaryotic type
rRNA processing factors
116173185
Chromosome and associated proteins [BR:
ppyr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
116173185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
116173185
NCBI-ProteinID:
XP_031346371
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MGDWTYNSQPPYPHSQGWHNYPPPEHAHPVPPPLSAPPPPDYSQAVPSYGNNYYNNYNYN
YNPNYPPPNYQYPNSYNYPGYGYPPYNQYAPPSYPPPYYPPQTPPYYNCPKREDSSNGGY
REGGTSYDYSKELESYKSLQSNNGKTYEKDHHSSEQKKHDYGDYDRRKFRARSRPRYRRS
RSPVRRSYKPSTRPSYTNNTNQSPKEITERDLILTKWRKNYCSTGEEVCDKIRELSKIGV
DEIMEAEMNIWTRTTPADLYYEKDPNNSKNTIATERLLKVCESFKENLMLRAKKINEIKP
KYEPPPRKNRARLCKHKLEEASSSDSSEEELTDEEDCSMEELTRKQQHPDRLHPEMWYND
PGEMNDGPLCRCSKRSSKCGIRHGIYAGERFLKTCHKLSNNSDKLYHYRITISPPTNFLI
KTPTIIPYDEHEFIFEGFSMFSHIPLIKLPTCKVIRFNIEYSILYIEEKIPENFVILELD
LFYDYLFKEILELVDLDFKAAGDEQGCSQFHFMPRFVRKLPDNGKEILSMKEVLQYFLDN
AIPLIDENHLEDMVNMSQYEWQAYADEIKGMVVTYPGKKPCSVRVDQLDRNSDLQTPGNY
KFPEIVHFGIRPPQLSYAGNPDYQKAWRDYVKFRHLLANMSKPTFEDKRKLEAKENKLQE
MRTQSKMKRDVTVAVSSKGFYRTGIMCDIVQHAMLIPVLVCHLRFHNSLNVLEETIEYKF
QNRAILQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLIN
IMSRFGKKQETESNITHNERLEFLGDAVVEFLSSIHLFYSFPDLEEGGLATYRAAIVQNQ
HLAVLARALNLDQYMLYAHGSDLCHDLELRHAMANCFEALMGALFLDGGIEVADKVFSNT
LFKSDPDLFDVWMKLPRHPLQEQEPRGDREWISKFQLLRKLTKFEDSIGVEFNHIRLLAR
AFTDRSVGYTNLTLGSNQRLEFLGDTVLQLIASDYLYKYFPEHHEGHLSLLRSSLVNNRT
QAVVCDDLGMSAYAVYNNPKAELKTKDRADLLEAFIGALYVDQGMEHCEVFCQVTLFPRL
QDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRVYTVAVYFRNKR
LASAMGHSIQQAEMNAAKKALEISHDLFPQLDHQKRVIAKSMKKQKKHPRYARRRLTERS
RSRSRSRHRRRSRSRHRSRSTSPKRAISRNGKRSRSASRSRLPVRSPLISNKRVRSRSQS
STKTNLRPKTKSRSKSQNKSLSRSKSRSLSRFKSRSLSRSKSRSPLSSKSRSLSKSKSKS
PSGFRSRSPSRSKSRSLSRSKSRSLSRSKSTSSSRSKSSYQSKLKNGIRSSRSRSNSSKP
KSRSLSCSSTDSRYTTKAVGSELANHI
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgggagattggacatacaattcacaacccccttacccacactcacagggttggcataat
tacccaccgcctgaacatgctcatcctgttcctccccctctttctgctccacctccccct
gattattcacaagcagtcccttcttatggaaataactactataataattacaactataat
tataatcccaattatcccccccctaattaccaataccctaattcttataattaccccggt
tatggttatccaccctacaaccaatatgctcctccgtcgtatccacctccctactatcct
cctcaaactcccccgtattataactgtcctaagcgagaagatagtagtaacggcggctat
agagaaggtgggacatcgtacgattactcaaaggaattggaatcctataaaagtttacaa
agtaataacggcaaaacttatgaaaaagaccaccatagctctgaacagaaaaagcacgat
tatggggactatgaccgcagaaaatttagagcacgtagcagacctaggtatcgtcgatcc
cgttccccagtacgtagaagttacaagccaagtacccgaccctcctatacaaataacacc
aatcaatcaccgaaagaaatcacggaacgtgatttaattttaacgaagtggaggaagaat
tattgctctacgggcgaggaggtatgcgataagattagggaattatcaaaaattggtgta
gacgaaataatggaggcggaaatgaatatttggactcggacaactccggcagatttgtat
tacgaaaaggatccaaataattctaagaatacgattgcaactgaaaggttactgaaggtt
tgcgaatcgtttaaagaaaatttaatgttgagagctaagaaaattaatgagattaagcca
aagtatgaacctccaccaaggaaaaatagggctcgtctttgtaaacacaaattggaagag
gctagtagttcagacagttcagaggaggaactgactgatgaagaggattgtagtatggag
gaattaactcgtaagcaacagcatccagacagattacatccagaaatgtggtataatgat
ccaggtgaaatgaacgatggcccactgtgcagatgttcgaagaggtctagcaagtgtgga
atcaggcatggtatctacgcaggagaaagatttcttaaaacttgccataaattatccaat
aactccgataaattgtatcattatcgaatcaccatatcgccaccaacaaacttcctcata
aaaactcccacaatcattccatatgacgagcacgagtttatattcgaaggattttcaatg
ttctcgcatattccattaataaagctgcccacgtgtaaagttattaggttcaatattgag
tattccattctttatatcgaagaaaagatcccggaaaattttgtcatattagaactggat
ttattctacgactatttgtttaaagaaattttagaattggttgatttagattttaaagcg
gcaggagatgagcaaggctgttcccaatttcattttatgccaagatttgttagaaagttg
ccagataatggaaaagaaattttatctatgaaagaagtgttacagtacttcctggataac
gcgattcctttaattgatgagaatcatttagaagatatggttaacatgagtcagtacgaa
tggcaagcgtatgcggatgaaattaagggaatggttgtgacttacccaggcaaaaagcca
tgttctgtaagagtagatcagctagatcggaacagtgaccttcaaactccgggcaattat
aaatttcccgaaatagtccattttggaatacgtccgccacaattaagttacgctgggaat
cccgattaccaaaaggcatggagagattatgtgaaatttagacatcttttggccaacatg
tcgaagccaacatttgaagataagcgcaagttagaagctaaagaaaacaaattgcaagag
atgagaacacaatcgaaaatgaagcgagatgttacggttgcagtttcatctaaagggttt
tatcgtactggcattatgtgtgatattgttcagcatgctatgttgattccggttttggtg
tgccatttaaggtttcataactcattaaacgttctagaggaaaccatagagtacaaattt
caaaatagagccattctccaattggctcttactcatccgtcgtatagggaaaactttggt
accaatccagatcatgcgcgtaacagtttaaccaattgtggaataagacaaccggaatat
ggagacagacgtatacactacatgaataccaggaaaagagggattaatactcttataaat
attatgtctcggtttggcaagaaacaagaaactgaatctaatatcactcataatgaaagg
ttagaatttctgggcgatgccgttgtagagttcctatcttcaatacacttgttttattcc
tttcctgatctggaggagggtggtttggcgacgtacagagccgcaattgttcaaaatcaa
catctggcagtactggcacgtgctttaaacttggatcaatacatgctgtatgctcacggc
tcagacctatgtcacgatttggaactgagacacgctatggccaattgttttgaagctctg
atgggtgcactatttttagatggtggtattgaggtagccgataaggtatttagcaatact
cttttcaaatctgatccagatttatttgacgtttggatgaagttgccacggcatccctta
caggagcaggaaccaaggggagatcgggaatggatctcaaaatttcaacttcttaggaaa
ctaacaaagtttgaagattctattggagtggaatttaatcatatacgcttattggcaagg
gcgtttacggatcgaagcgtcggctatacaaatttgacactcggttcgaatcaacgttta
gaatttctcggggacaccgttttacaacttatagcttccgattatttatataagtacttt
cctgagcatcacgagggtcatttgtcacttctgagaagttctttggtgaacaatcgcacc
caagcagttgtctgcgacgatctgggtatgtccgcctacgccgtctacaataaccccaaa
gctgaactcaaaacaaaagacagagccgatttacttgaagcatttattggagcactttat
gtcgatcaaggtatggaacattgcgaggtattctgtcaggttaccctgtttccacgattg
caagactttatcatgaatcaagattggaacgatcccaaatctaaattgcaacagtgttgt
cttacccttcgaactatggatggtggggaacctgatattcccgtgtataaagttatcgaa
tgtaagggtccgacaaatacgcgcgtatatacagttgcggtttattttcgaaacaaacgc
ctcgcaagcgctatgggtcacagtattcaacaggcagaaatgaatgctgccaaaaaagcg
ttagaaatttcacatgatttattcccacaattagaccaccagaagcgggtgatagcaaaa
agtatgaaaaagcaaaagaaacatccaagatacgccagacgtcggctgactgagcggtct
aggtcaagaagtcgatctagacacagaaggagatcgcggtcgaggcacagatcaagatct
acatctccaaagagagcaatatcaagaaatggtaaacgatctaggtcagcaagtcgatct
agactacccgtcaggtcgccattgataagcaacaagagagttcgatcaaggtctcagtca
tcaactaaaacaaatcttagacctaaaactaaaagtcgatctaagtcccaaaataaatct
ttgtcaagatctaagagtagatcactatcaaggtttaaaagtagatcactgtcaagatct
aaaagtagatcacccttaagctctaaaagtagatcgctgtcgaagtctaaaagtaaatca
ccctctgggtttagaagtagatcaccgtcgaggtctaaaagtagatcactttcaagatct
aaaagcagatcactatcaaggtctaaaagcacatcatcatcaagatcaaaaagtagctat
caatcaaaacttaaaaatggaattcgatccagtagatctcgatctaatagttctaaacct
aaatcgcggagtctatcatgttctagtaccgattctcgttatactacaaaggctgttggt
agtgaattagcaaatcatatttga
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integrated database retrieval system
