Photinus pyralis (common eastern firefly): 116173349
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Entry
116173349 CDS
T07438
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116173349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116173349
03009 Ribosome biogenesis [BR:
ppyr03009
]
116173349
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116173349
Spliceosome [BR:
ppyr03041
]
Complex A
U1 snRNP components
U1 related factors
116173349
Complex B
116173349
Ribosome biogenesis [BR:
ppyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
116173349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RE_AccI
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116173349
NCBI-ProteinID:
XP_031346612
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MQYNGYQHNVVYRPRPNRGEQFNNKQSNYWKPPTHSLAAVQDFGGPNSKQQNPQQKGHED
KLVWDMTTLQPFRKNFYVPHMDIQNRSQTDIDSFRDEKAITVKGTNVPNPSECFDETNFP
DYVMQEIIRQGYAEPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYMVPAAIHINHQQRP
QRGEGPIVLILAPTRELAQQIQQVARDFGAPSMIRNTCVFGGCPKGPQARDLERGVEIVI
ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIITQIRPDRQVLMWSATW
PKQVQALAEDFLVDYVQINVGSLALSANRNIRQIVEVYEENEKEGKLLGLLKEIAADQNN
KIIIFVETKKKVDDITKCIRMEGYSAISIHGDKSQPERDYVLTEFRNGKASILVATDVAA
RGLDVEDVKYVINLDYPNSCEDYVHRIGRTGRCEQVGTAYAFFTPNNQRQAKDLIAVLEE
SGQQVNPKLRELASNSRGGQNTRNRWQNRNKDNSSPNSNNGSGKRNVWNSNRLSNNIEQR
QPSMRYNNNNIRNGEMYQRNNMRNSAPPMAYSNGYQNPMGNQGYPQQNAYGPPPTPRGYG
PPSRNGNMMNGQRYNQRQAFSGPPPANSPNMYPVAPPYMMSGVPPPDDIHCLINHKFFQS
NRPPPTNPCGYQSINQPFNQYSPPLPPYAYQYSQPATAVQQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcaatataacggatatcaacataacgttgtatatcgtccgcgccctaatcgtggtgaa
cagtttaacaataaacaatctaactactggaaaccacctacacattctctagctgcagtc
caagacttcggagggccgaattcgaaacaacaaaacccgcaacagaaaggtcacgaagat
aaactggtttgggacatgaccacccttcaaccatttcgcaagaacttctacgttccacac
atggatatacagaaccgatctcaaacagatattgatagtttccgcgatgaaaaagccatt
acagtcaagggaaccaacgttccaaatccgagtgaatgcttcgacgaaactaatttcccc
gattatgtaatgcaagaaattattaggcaggggtatgcagaaccgacacctatacaagcg
caaggctggccgatcgcgctctcgggacgcgacatggtcggaatcgcacagaccggttcc
ggtaaaacgttagcttacatggtcccagcagcaatacatatcaaccaccaacagcgtccg
caaagaggcgaaggccccatcgtactaatcctcgcccccaccagagaattagcgcagcaa
atacaacaggtagcgcgtgatttcggcgcgccaagcatgattcgaaacacgtgcgttttt
gggggatgccccaaaggtccgcaggctcgtgacttggagcgcggtgtcgagattgtcatt
gctactccaggccgactaatcgattttctcgagaagggtacgaccaatttgcaacgatgc
acctacttggtgttggatgaggccgatcgaatgttagatatgggtttcgaacctcaaatc
aggaagattatcacgcagatacggcctgacaggcaggttttgatgtggtcggcgacgtgg
cctaagcaggtgcaggcgcttgctgaagattttctcgttgattatgtacagattaatgtt
ggatctcttgcactgtctgctaaccggaatattaggcaaattgtggaagtatatgaggaa
aacgaaaaggaaggtaagctgctaggtttactgaaagaaatagctgccgatcaaaataac
aaaataattatattcgttgaaacgaaaaagaaagtagacgatatcacgaaatgcattcgt
atggaaggttactctgccatctccatacacggtgataaatctcaaccagaacgagattac
gttttaacagagtttagaaatggcaaagcatccattttagttgcgacggacgtcgcggca
cgtggtttggacgtggaggacgtcaagtacgttattaatttagattatccaaattcgtgc
gaggattacgttcatcgaatcggccgcactggccgttgcgagcaagtcggcacagcttac
gcgtttttcacgccaaataatcaaaggcaggctaaggatttaatagcggtgttggaggaa
tctggtcagcaggttaatccgaagttgcgcgagctggcgtcaaactcgcgcggcggtcag
aatacaaggaatcgttggcaaaaccgaaacaaagacaactcatcaccgaactctaataat
ggttccggcaagagaaatgtgtggaattcaaatcgactttctaacaacattgaacaaagg
cagccttcgatgcgttacaacaacaacaacattcgtaacggggaaatgtatcagaggaat
aacatgcgaaattccgctcctccgatggcatattcgaatggttaccaaaatccgatgggc
aatcaagggtatccacagcagaacgcatatggtcctccaccgacaccacgaggctatggc
cctccatctcgtaacggcaacatgatgaacgggcaacgttacaaccagcggcaagcgttc
tctggacctccccctgctaacagtccaaatatgtatcccgtcgcgccgccctacatgatg
tcaggtgttccacctccggacgacattcattgcctgatcaatcacaaatttttccagagc
aacagacccccgccgactaatccgtgcggttatcagtcgataaaccaaccctttaatcag
tactcgccccctctgccgccatacgcttaccaatattcacagccggctaccgccgtgcaa
cagtaa
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