Photinus pyralis (common eastern firefly): 116173434
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Entry
116173434 CDS
T07438
Name
(RefSeq) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03082
ATP-dependent chromatin remodeling
ppyr03083
Polycomb repressive complex
ppyr04213
Longevity regulating pathway - multiple species
ppyr04330
Notch signaling pathway
ppyr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116173434
03083 Polycomb repressive complex
116173434
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116173434
04350 TGF-beta signaling pathway
116173434
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
116173434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyr03036
]
116173434
Enzymes [BR:
ppyr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116173434
Chromosome and associated proteins [BR:
ppyr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
116173434
HDAC complexes
Sin3A-HDAC complex
116173434
BRAF-HDAC complex
116173434
REST complex
116173434
SHIP complex
116173434
MiDAC complex
116173434
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116173434
Heterochromatin formation proteins
Other heterochromatin formation proteins
116173434
Chromatin remodeling factors
NuRD complex
116173434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
116173434
NCBI-ProteinID:
XP_031346774
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MAMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
AEEMTKFHSDDYIKFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFMMVGG
GGYTIRNVSRAWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDAIHEDSDNEDKVDKDERLPQKELDKRIAPENDF
SDSEDEGEGGRRDQRSYKGRKRPRLEKGGDSKDGGLDDKSLKDELKSDKDDKEDLKSSIE
DNKKEVGVAP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaaccgcacagcaagaagagggtttgttattactacgacagcgacattggc
aattactactatgggcaaggacatccaatgaaacctcatcgtattcgtatgacccacaac
ttgctgctcaactatggcttatacagaaaaatggaaatatacagaccacacaaagctaca
gcagaggagatgacgaaatttcactcggacgactatatcaagtttttacgttcaattcgt
ccagataacatgtcggaatacaataaacagatgcaaaggtttaacgtaggcgaggattgt
ccagtattcgacggactctacgagttttgccaactgtccgcggggggatcggtagctgcc
gcagtaaagctgaacaagcaggcgtccgaaatttgtattaattggggcgggggtttacat
cacgccaaaaagtcggaagcatccggtttctgttacgttaatgacattgtgctcggaatt
ctcgagctcttgaagtaccaccaacgggtgttgtatattgatatcgatgttcatcacggt
gatggtgttgaggaggcgttttatactacagatcgagtgatgacggtctccttccataag
tatggggagtattttccgggcacgggcgatctgcgcgatatcggtgcgggaaaagggaaa
tattacgcggtcaatataccgttacgcgatggtatggacgacgagtcctatgaaagtata
ttcgtgccgattatcagcaaggtgatggagacttttcaaccgagcgccgtggtcttgcag
tgcggggccgattcgcttaccggcgaccgtttgggttgcttcaatctgaccgtgcgcggt
cacggtaaatgcgtcgagttcgttaagaagtacaatttacccttcatgatggtgggaggt
ggcggttacaccattcgaaatgtgagccgcgcgtggacttacgagacttcggtcgcgttg
ggagtggagattgctaacgaattgccgtataacgattacttcgagtatttcgggcccgat
tttaagttgcacatcagcccgagcaatatggcgaatcagaatacgcccgagtatctcgag
aagattaagactcgactgttcgaaaatctccggatgcttcctcacgcccccggagtgcag
gtgcaggcgatacctgaggatgctatccacgaggattcggataatgaggataaggtcgat
aaggacgaaaggttaccacaaaaggagttggataaacgcatcgcgccagaaaacgacttc
tcagacagcgaagatgaaggtgagggcggaaggcgggatcagaggagttataagggtaga
aagcggcccaggttagagaaaggtggtgacagcaaagacggcggattggatgacaaatcc
cttaaagatgaattgaaatcagataaagatgataaagaggatttgaagagcagtattgaa
gacaataagaaggaggtgggggttgcgccgtga
DBGET
integrated database retrieval system
