Photinus pyralis (common eastern firefly): 116174009
Help
Entry
116174009 CDS
T07438
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03018
RNA degradation
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116174009
09123 Folding, sorting and degradation
03018 RNA degradation
116174009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116174009
03041 Spliceosome [BR:
ppyr03041
]
116174009
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116174009
mRNA degradation factors
5'-3' decay
Lsm complex
116174009
Spliceosome [BR:
ppyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116174009
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
LSM14
SM-ATX
Motif
Other DBs
NCBI-GeneID:
116174009
NCBI-ProteinID:
XP_031347645
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MSSMPVSSSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTEYETTP
EGRRITKLDQILLNGNNITMLVPGGEMPE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtatgccagtatcctcatccactttactacctttagaattggtagataagtgc
atcggctcgagaattcacattatcatgaagaatgacaaggaaatcgtcggtacgctgctt
ggtttcgacgattttgtcaacatgctacttgaagatgtgaccgaatacgaaacgacaccc
gagggcagacggataacgaagctagatcaaatcttattaaacgggaataatattacaatg
ttggtgcctggtggagaaatgcccgagtag
DBGET
integrated database retrieval system
