Photinus pyralis (common eastern firefly): 116174798
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Entry
116174798 CDS
T07438
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116174798
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116174798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116174798
04131 Membrane trafficking [BR:
ppyr04131
]
116174798
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116174798
Membrane trafficking [BR:
ppyr04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
116174798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
116174798
NCBI-ProteinID:
XP_031348648
UniProt:
A0A1Y1L2D2
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MFEAQEVNAEHKDLIHDVAYDFYGERMATCSSDQYVKVWDQNSEGKWNLTSSWKAHSGSV
WKVTWAHPEFGQVLATCSFDRTAAVWEELVGETPGPGERGTRHWVRRTNLVDSRTSVTDV
KFGPRTQGLQLATCSADGVIRIYEAPDVMNLSQWTLQHEIQCKLSCSCLTWNPSLSKNHP
LMLAVGSDDTNLSAGGKVFIYEYSDNIRRWIKTDTIASVTDPVHDIAFSPNLGRSFHLLA
IATKDVRIISLAPIPDNANTQSGLNKLDIQTAAQFDDHGCMVWRVCWNITGTILASSGDD
GCVRMFKMNYINAWKPVAVLKGDGSHISNEGHRSSVSSAASLPTPPMAAVSQTARLNEPG
VAWSISDVALAIHGGLAYGITF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagctcaagaagtaaatgcagagcacaaagacttaatacacgatgttgcatac
gatttttatggcgagcgaatggcgacatgttcgagcgatcaatacgttaaggtgtgggat
caaaatagcgaaggcaagtggaatttaacgtccagctggaaggcgcacagcggctcagtg
tggaaagtaacttgggcgcatcccgaattcggccaggttctagcgacctgctcgtttgat
cgaacggccgccgtctgggaggagttagttggtgaaacgcccggcccgggggagagaggt
acgcgtcattgggtgcggagaacgaatctggtcgactcacgcacgtctgttacggatgtg
aagtttggaccgagaacgcaggggctacagcttgcaacttgctcagctgacggtgttatt
agaatttatgaagcgcccgatgttatgaatttaagccagtggactctacagcacgagatc
caatgtaaattatcgtgcagttgtctaacctggaatcccagcttatcaaagaatcatcct
ttgatgctggccgtgggaagtgatgataccaacttgtcagcaggcgggaaagtcttcata
tacgaatacagcgacaacataaggcggtggatcaagactgatacaatagcaagcgttaca
gatcccgttcatgacattgcattctcccccaatctaggacgtagttttcatttattagcc
attgcaactaaagacgttaggatcattagtttggctcccattcctgataacgctaacacc
caaagtggactgaacaagcttgacatacaaacagcagcacaattcgatgatcacggttgt
atggtgtggagagtgtgttggaatattaccggcacaattttggcatcaagtggagatgat
ggttgtgttcgtatgtttaaaatgaactacatcaacgcttggaagccagttgcagtatta
aaaggtgacggctcgcatattagcaatgaaggccatcgctcatcggtctcttccgctgca
agtctacctactcctccaatggccgctgtctctcaaactgcaagattaaatgaaccagga
gtcgcttggtccatttctgatgtggcgttggctatccatggaggtcttgcttatggaatt
acattttaa
DBGET
integrated database retrieval system
