Photinus pyralis (common eastern firefly): 116175313
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Entry
116175313 CDS
T07438
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116175313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyr03041
]
116175313
Enzymes [BR:
ppyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116175313
Spliceosome [BR:
ppyr03041
]
Complex C
Other components
Step II factors
116175313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
RSRP
nSTAND3
Flavi_DEAD
SART-1
AAA_30
PhoH
AAA_16
Sigma54_activ_2
TsaE
Motif
Other DBs
NCBI-GeneID:
116175313
NCBI-ProteinID:
XP_031349249
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MNELEKLEHLSLVSKVCTELENHLGINDKDLAEFIIHLSKKHSTLEDFKKVLAENGAEFS
ESFSANLLRIIQHMNPDKSNDIIISTPHTDELSKKFPGLALPNKAPVELPPPEIKEEKIS
DSEIVDDLMAQFEAQAPSKSTVPDEKSVKNEKRSRSRDREKRSRRSRSRERDRHRRRSRS
RNRHRDRYRDKRDRSRDRSGHRRNRSRDRHRSRSRDRSRSRDRKIYEKKIKRESPEIDDD
PTPGNIYNGKVANIVPFGCFVQMEGLKRRWEGLVHISQLRAEGRVTNVSEVVSRGNKVKV
KVLSVTGQKVSLSMKEVCQFTGKDLNPLSHATQEREDKDRNPDRPTYNSTSVLRLPLGIE
EDDESSRKRVTRISSPERWEIKQMISSGCIDKSELPDFDDETGLLPKEEDGEADIEIELV
EEEPPFLQGHGRAVHDLSPVRIVKNPDGSLAQSAMMQSALAKERREQKMLQREHEMESLP
SGLNKNWIDPLPEADRALVANMRGIGLQSQDLPEWKKHVIGGKKSSFGKKTNMTIIEQRQ
SLPIYKLREELIKAVTDNQILIVIGETGSGKTTQITQYLAESGFTARGKIGCTQPRRVAA
MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLMDLDLKSYSVIM
LDEAHERTIHTDVLFGLLKQAVTKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFP
VEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPD
VPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQK
VYNSKTGMDSLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRT
NLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSALDDEGLLTRLGRRMAEF
PLDPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHL
TLLAVYNSWKNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSCEKNTVRV
QKAVCSGFFRNAGKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMR
EVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattggaaaaactagaacacttgtctttggtttctaaggtgtgcacagagttg
gaaaatcatctgggaattaacgataaggacttggctgaatttataattcatctatcgaaa
aaacatagtacgttggaagattttaaaaaagtactcgctgagaatggggccgaattttca
gagtctttctctgcaaacctactcagaatcattcagcacatgaatccggataaaagcaac
gacataattatctccacgccgcatacagatgaattgtcaaaaaaattccccggtctggct
ttgccgaataaagcgcccgtcgagcttccgccgcccgaaatcaaggaggagaaaataagc
gattctgaaatagttgacgatttgatggcgcagtttgaggcacaggcgccgtcgaaatcg
acggtgccggacgagaaaagcgttaagaatgagaaacgcagtcgtagtcgcgatcgtgaa
aagcgcagccgtagaagcagaagtagggaacgggataggcatcgtcgcaggtcgcgaagt
cgcaatagacatcgagatcgttacagggataagagggataggtccagggacagatctggt
catcgcaggaataggtctagagatcgccataggagtagatccagagatcgtagtaggtca
cgggatcggaaaatctacgagaagaaaatcaaacgggagagtcccgaaattgatgacgat
ccaactcccggaaatatttacaatggcaaggtggccaatatagtaccgtttggatgtttt
gtccaaatggaaggcttgaagagacgctgggaagggctggtgcatatatcacaattgaga
gccgaaggaagagtgactaacgtgtctgaagtagtttcccgaggcaacaaagtcaaggtt
aaggtgttgtccgtgaccggtcagaaggtttcgttgtcaatgaaagaggtatgccaattc
acagggaaggacttgaatccactttctcacgcaacccaagaacgcgaagacaaggatcga
aatccagaccgacccacttacaattcgacctccgttttacggttacccttaggcattgag
gaggacgatgagagctcgcgtaaaagagtgacccgaatatccagccccgaaagatgggaa
ataaaacagatgatctcgtccggatgcatcgataaaagcgaactgcccgactttgacgac
gaaaccggtttattacccaaggaggaggatggagaagccgacatcgaaattgagctagtc
gaagaagagccgccgtttcttcaggggcacggcagagcagtgcacgatctcagtcccgtt
agaattgttaaaaatcctgatggttcacttgcccaatcggctatgatgcagtcggcgctc
gccaaagagagacgcgagcaaaaaatgttacaacgggaacatgaaatggaatcgctgccc
tctggtttaaataagaattggatcgatccgttgcctgaagccgatcgtgctttggttgca
aatatgagaggaataggacttcagtcccaagacctccccgaatggaaaaaacacgtaatc
ggtggtaaaaagtcttcatttggtaaaaaaaccaatatgacaataatcgaacaaagacag
tcgctccctatttacaagctacgtgaggaattaatcaaagcggtgacggataatcaaatc
ttaatcgtaattggagaaactggtagcggcaaaacgacgcagatcacgcagtacttagcg
gagtcgggatttacggcgaggggaaagattggatgtacgcaacctcgtcgtgtcgccgcg
atgtccgtggcgaaacgggtcgccgaggaatttggttgtcggttaggtcaagaagttggg
tacacgattcgttttgaggattgcacaagtcccgaaacggttataaagtacatgacagac
ggtatgttactgcgcgagtgcttaatggatttggatcttaaaagctactcagtcatcatg
ttggatgaggcacacgagcgtaccattcacacggacgttttattcggtctactaaagcaa
gcagtaacaaagcgccccgaacttaaattaatagtaacttcggctacgttagacgccgtg
aaattttctcaatatttctttgaagctcccatttttacaattcccggacgtacattcccc
gtggaggtgttgtacaccaaggaaccggaaactgattatttagacgcgagcttaataaca
gtcatgcagatacacttgcgcgaaccacccggcgatattctattgtttttaacgggccaa
gaagaaatcgatacggcgtgcgagatcttgtacgaacgaatgaagtccctaggcccggac
gttcccgaactaatcattcttccagtgtactctgctttaccgtcggaaatgcagacgaga
attttcgaacccgccccgcccggcagtcgcaaggtggtaattgcgacaaatattgccgaa
acctcgctgacgatcgatggaattttttacgtggttgatcctggatttgtaaaacaaaaa
gtgtataattcgaagactggtatggattcgctagttgtcacaccaatatcgcaggcacag
gcaaagcaaagggcgggtagagctggacgtaccgggccgggcaagtgttacaggttatac
acggaacgggcttaccgagatgaaatgttgcccactcccgtacctgaaattcaacgtacg
aacttggcgaccactgtgcttcaactgaaaacgatgggaatcaacgacctattgcatttc
gactttatggacgccccacctgtcgaatctttgatcatggcgttggaacagttacattcc
ctttcggcactcgatgatgaaggtttactaacaaggctagggagacggatggcggaattt
cctttagacccgaacctctccaagatgttaattatgtcagtcgccctacaatgctccgat
gaaattcttacaatagtcagtatgctttcggtgcaaaatgtcttttaccgtccgaaagac
aagcaggcgctcgccgatcagaagaaggccaagtttaatcaaccggaaggcgatcattta
acactcctagccgtctacaacagttggaagaataacaaattttcaaacgcgtggtgttac
gaaaacttcgtacaaattaggaccttgaaacgagcgcaagacgtccgcaagcaactgttg
ggaataatggatcgtcacaagctggacgtcgtgtcgtgcgagaagaacacagtgcgagtt
cagaaggcggtttgttcgggattttttaggaatgccgggaagaaagatcctcaggaaggt
tatcgtacattagtcgacagtcaagtggtctacatccatccttcaagcgcgctctttaac
agacagcctgagtgggtcatataccacgagttggtccaaacgacaaaggaatacatgcga
gaagtaacaacaatcgatccaaagtggctggtggagtttgcacctgctttctttaaattc
tccgatccgactaagcttagcaagtttaagaagaatcagagattggaaccgttgtataat
aagtatgaagagccaaatgcgtggagaatatcacgagttcgaagacgtagaaattaa
DBGET
integrated database retrieval system
