Photinus pyralis (common eastern firefly): 116175621
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Entry
116175621 CDS
T07438
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03020
RNA polymerase
ppyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116175621
09124 Replication and repair
03420 Nucleotide excision repair
116175621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116175621
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116175621
Enzymes [BR:
ppyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116175621
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116175621
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116175621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
116175621
NCBI-ProteinID:
XP_031349698
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYEQDEDQFEDEDAEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIDLQAEAQHTSGEVENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIETQHQKTFIGKIPIMLRSTYCLLSGLTDRDLMELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAMKDGKYAFKSEIRSCLEHSSRPTSTLWVNMM
ARGGQAIKKAAIGQRIIAILPYIKQEIPVMVVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMSTLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGQLLLKKRHIDMLKEREYNNYGWQVLVAQG
VVEYIDTLEEETVMIAISPDDLRQEKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSECKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIISPGIRVSGDDVVIGKTMTLPENDDELDGTTKKFSKRDASTFLRNS
ETGVVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YHLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMSMNIAPRLMVM
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaacaagatgaagatcagttcgaagatgaggacgccgaagaaatcagttcggaa
ttgtggcaggaagcctgctggatcgttattaacgcatactttgacgaaaagggcctggtt
cgacagcagcttgatagtttcgacgaatttattcaaatgtccgtacaacggattgtcgaa
gattcgccacagatcgatcttcaagcagaagcacaacacacaagtggtgaagtcgaaaac
cctcctcggtacttgttaaagtttgaacaaatttacctttctaagcctacacattgggaa
aaagacggtgcaccttcgcctatgatgcctaacgaagccaggctacgtaacttaacctat
tctgcccctttatacgttgatatcacaaaaacaatagtaaaagatggcgaagatcccata
gagacccaacatcaaaaaacattcattggaaaaattcccattatgttgcgttccacatat
tgtctactaagcggattaactgatcgtgatttaatggaacttaacgaatgtcccttagat
cctggtggctattttattattaacggctcagaaaaagtcttaattgcgcaggagaaaatg
gcaacaaacactgtttatgtatttgcaatgaaggacgggaaatatgccttcaaatcggaa
attcgctcatgtttggaacatagttcccgtcccacatcgacactttgggtcaacatgatg
gcgagaggtggtcaggccataaagaaggcggccatcggtcaacggatcatcgcaatttta
ccgtatatcaaacaagaaattccggtcatggtcgtatttcgtgcactcggttttgtggcc
gatcgagatatattggagcatatcatttatgactttgaggatcccgagatgatggaaatg
gttaaaccgtctttagacgaggcctttgttattcaagaacagaatgtcgctttaaatttc
atcggtgcaagaggggcaaggccgggtgtcactaaagagaaacgtattaaatatgctaga
gaaattttacagaaggaaatgttgccacatgttggcgtttctgatttctgtgagacaaaa
aaagcttatttcttggggtatatggttcacagattgttacttgctgctttaggtcgtcgt
gagttggacgacagagatcattacggcaataaacgtttggatttggccggacctttactt
gcattcttattcagagggctgttcaagaatcttatgaaagaagtgagaatgtacgcgcaa
aaattcattgatcgtggcaaagactttaacctagaccttgccataaagacaaagcttata
acagatgggttacgttactctttggctaccggcaattggggcgatcaaaagaaagcgcat
caagcgagagcgggcgtatctcaagtattgaatcgtctaacctttgcctccaccctctct
cacttacgacgcgtcaattcgcccataggaagagacggaaagttggcgaaaccgcgtcaa
ttacacaatacactatggggaatgatatgtcccgccgaaacgcccgaaggtgccgccgta
ggtctggtgaaaaatttggccttaatggcttacatttctgtcgggtctcaaccatcgcca
atcttggagtttttggaggaatggtcgatggaaaatttggaggaaattgcaccgtcggca
attgcagatgctacaaagatttttgtgaacggctgttgggttggtattcatcgagatcct
gagcaattgatgtcaactttaagaaaattacgtcgccagatggacatcattgtgtccgaa
gtgtcaatgatccgtgatattcgcgatcgggagattcgtatttatacagatgccgggcga
atctgtagacctttgctaatcgtcgagaatgggcagcttttgttgaaaaaacgccatatt
gatatgttgaaggagcgcgagtataacaactacggttggcaggtgttggtggcacagggt
gttgtcgagtatatcgatacccttgaagaggaaaccgttatgattgccatatccccagat
gatttacggcaggagaaagattacgcttactgtactacatatacacactgtgaaattcat
ccggcaatgattttgggagtgtgcgcttctatcattccattcccggatcacaaccaaagc
ccgagaaacacttaccaaagtgctatgggaaaacaggccatgggtgtatatattacaaat
ttccacgttcgtatggacactctcgcgcatgtgttatattatcctcacaaaccacttgtt
acaacacgctctatggagtatctacggtttcgagagttacctgctggaattaatagtatt
gtcgcgatcgcatgttacacgggctacaatcaagaagattcagttattttgaacgcctcc
gccgtagaaagaggctttttcagatctgtcttttatcgttcgtacaaagattcagaatgc
aaaaggatcggcgatcaagaggaacaatttgagaaacctacaagacaaacttgccaaggc
atgaggaacgctctctatgacaagctcgatgacgatggcattatttcccctggtattcgt
gtgtccggagatgatgttgtaattggtaaaactatgactcttcctgaaaacgacgacgag
ttagacggaactacgaagaaattctctaagcgggacgcgtcaacttttctacgtaacagt
gaaactggtgttgttgatcaagtaatgttaacactgaattctgagggatataaattctgt
aaaattcgtgtgcgatcagtgcgcattccacaaattggagataaatttgcgtcgagacac
ggtcagaaaggtacctgcggtattcagtatcgccaagaagatatgccgttcacatgtgaa
ggtattacgcctgacattatcattaatcctcacgctatcccgtcccgtatgacgattggt
cacttgatcgagtgcattcaaggaaaggtatccgcaaataaaggcgaaattggtgacgcg
acacctttcaatgatgccgtaaatgtacagaaaatttccactttgcttcaagagtacggg
tatcacttgagaggaaacgaagttatgtacaacggccacacaggtcgcaaaataaacgca
caaattttcttgggccccacttactatcaacgtctcaagcacatggtcgacgacaaaatt
cactcgcgtgctaggggaccagtacagatccttgtgcgtcagcctatggaaggtcgtgcc
cgtgatggtggattacgtttcggagagatggagcgggattgccaaatttcgcatggtgct
gcacaatttttaagggagagactttttgaagtatcagacccataccgcattcatatctgt
aacttctgtggattgattgccattgcgaatttgagaaataacacatttgagtgcaaggga
tgtaaaaacaaaactcaaatatctcaaatccgtttaccctatgctgctaaattattattc
caagaactgatgagcatgaacattgcgccccgattgatggttatgtaa
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integrated database retrieval system
